Protein Alignment Rdl and LOC101883326

DIOPT Version :9

• Sequence 1: NP_001261617.1
• Gene: Rdl / 39054
• FlyBaseID: FBgn0004244
• Length: 608
• Species: Drosophila melanogaster
• Sequence 2: XP_021324924.1
• Gene: LOC101883326 / 101883326
• -ID: -
• Length: 358
• Species: Danio rerio
• Alignment Length: 429
• Identity: 123/429 - (28%)
• Similarity: 194/429 - (45%)
• Gaps: 113/429 - (26%)

  Fly   198 LCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQ 262
            :|...:.|.|||..||.::||.|..:|.....:|||||.::.::..:..:..:||:|.||:...:
Zfish    10 ICVCSLLSDGYTTDDIEFYWRGGNHAVTGVERIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFK 74

  Fly   263 FVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYV 327
            ..|::||:::|.|:||.||.|:||||||:|.:|:.||||||:||||||||:.:.....||||.||
Zfish    75 LKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYV 139

  Fly   328 KSIDVYLGTCFVMVFASLLEYATVGYM--AKRIQMRKQRFMAIQKIAEQKK-------------Q 377
            |:||:||..|||.||.:|||||.|.|:  .:..|.:|:......|...:|.             |
Zfish   140 KAIDMYLMGCFVFVFLALLEYALVNYIFFGRGPQQQKKAAERASKANNEKMRMDPNKWLVGNVVQ 204

  Fly   378 QLDG--ANQQQANPNPNANVGGPGGVGVGPGGPGGPGGGVNVGVGMGMGPEHGHGHGHHAHSHGH 440
            :.||  |..:|.:.:.:.::..|..|.             :..:|:|           .:.:...
Zfish   205 RDDGLYARMKQRDIDAHDSMWEPIFVD-------------DAALGLG-----------DSKNKMD 245

  Fly   441 PHAPKQTVSNRPIGFSNIQQNVGTRGCSIVGPLFQEVRFKVHDPKA-----------HSKGGTLE 494
            ||   :.:...|:   .|:..:||          .|:...:.||:|           :.|.|...
Zfish   246 PH---ENILLTPL---EIKNEMGT----------SELTLGLGDPRATMLAYDSTTLQYRKAGLAR 294

  Fly   495 NTVNGGRGGPQSHGPGPGQGGGPPGGGGGGGGGGGPPEGGGDPEAAVPAHLLHPGKVKKV----- 554
            :  |.||...:.|                              .|...:.|.......|:
Zfish   295 H--NFGRNALERH------------------------------VAQKKSRLRRRASQLKITIPDL 327

  Fly   555 KDINKLLGITPSDIDKYSRIVFPVCFVCFNLMYWIIYLH 593
            .|:|        .|||:||::||..|..||::||:.|::
Zfish   328 TDVN--------SIDKWSRMIFPTVFSFFNVVYWLYYVN 358

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdl	NP_001261617.1	LGIC_ECD_GABAR_RDL-like	83..266	CDD:349809	21/67 (31%)
		Neur_chan_memb	274..588	CDD:397193	95/346 (27%)
LOC101883326	XP_021324924.1	Neur_chan_LBD	<8..356	CDD:332142	122/425 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D226476at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.010