Protein Alignment Rdl and gabrp

DIOPT Version :9

• Sequence 1: NP_001261617.1
• Gene: Rdl / 39054
• FlyBaseID: FBgn0004244
• Length: 608
• Species: Drosophila melanogaster
• Sequence 2: XP_017948119.2
• Gene: gabrp / 100498164
• XenbaseID: XB-GENE-1012959
• Length: 401
• Species: Xenopus tropicalis
• Alignment Length: 557
• Identity: 148/557 - (26%)
• Similarity: 245/557 - (43%)
• Gaps: 170/557 - (30%)

  Fly    46 AATGGGSMLGDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYF 110
            |.||..:::.|             |:|.:||.:...|:|:.|::.|.||.::||..||:|.....
 Frog     3 ALTGSQAIMKD-------------YNKYLRPKFNEKPIEIAVSLEVASIDAVSEENMDYTATINL 54

  Fly   111 RQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITR 175
            ||.|||.||.:.   |..::::.:..::::|||||:.|:.|:|:.|..|..|..:|:..:|::..
 Frog    55 RQRWTDERLVFE---GNRSITLDARLVESLWVPDTYIVDSKKSFLHDVTVENRLVRLFANGTVLY 116

  Fly   176 SIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLGH 240
            :||:|.|.:|.|:|..:|||||.|.:::||:||:.:|:.|.|.....||.....::|.|:.|
 Frog   117 AIRITTTVACKMDLTKYPMDRQTCKLQLESWGYSEKDLTYVWMRANDSVRGMDHLQLAQYTV--- 178

  Fly   241 RQRATEINL---TTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVAL 302
            .|..|..::   .||||.|||......|::.|::::.||||.|:|::||||||::.::.|||...
 Frog   179 EQYYTTNSIGKDETGNYPRLALCFILRRNVVYFILETYIPSALLVVLSWVSFWISMSSVPARTCF 243

  Fly   303 GVTTVLTMTTLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLLEYATVGYMAK-RIQMRKQRF 365
            ||||||.|||:|..:....|..: .:|:||||||.||..||.:|||||...|.:: ...:.|::
 Frog   244 GVTTVLAMTTIMMGSRFNFPTANCIIKAIDVYLGICFSFVFGALLEYAFAHYCSELNSAVNKEK- 307

  Fly   366 MAIQKIAEQKKQQLD----GANQQQANPNPNANVGGPGGVGVGPGGPGGPGGGVNVGVGMGMGPE 426
              |:...|:.:..:.    ..:.:|.|...|.....|
 Frog   308 --IKNSLEEPEHDISSVLIACDSKQLNRKENQTENAP---------------------------- 342

  Fly   427 HGHGHGHHAHSHGHPHAPKQTVSNRPIGFSNIQQNVGTRGCSIVGPLFQEVRFKVHDPKAHSKGG 491
                             .|.::.|                 |::..|:.::
 Frog   343 -----------------EKNSLKN-----------------SVIFKLWLKI-------------- 359

  Fly   492 TLENTVNGGRGGPQSHGPGPGQGGGPPGGGGGGGGGGGPPEGGGDPEAAVPAHLLHPGKVKKVKD 556
                                                                      |:.::|.
 Frog   360 ----------------------------------------------------------KIIRLKK 366

  Fly   557 INKLLGIT-PSDIDKYSRIVFPVCFVCFNLMYWIIYL 592
            .|    :| |.::|:|||.|||:.|:..|::||..||
 Frog   367 FN----VTNPENVDRYSRTVFPLIFLIINIIYWTYYL 399

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdl	NP_001261617.1	LGIC_ECD_GABAR_RDL-like	83..266	CDD:349809	65/185 (35%)
		Neur_chan_memb	274..588	CDD:397193	68/320 (21%)
gabrp	XP_017948119.2	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D226476at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.010