Sequence 1: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012811146.2 | Gene: | gabrb1 / 100489344 | XenbaseID: | XB-GENE-6049110 | Length: | 477 | Species: | Xenopus tropicalis |
Alignment Length: | 559 | Identity: | 177/559 - (31%) |
---|---|---|---|
Similarity: | 275/559 - (49%) | Gaps: | 142/559 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 59 ISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRK 123
Fly 124 RPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMN 188
Fly 189 LQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLGHRQRATEINLTTGN 253
Fly 254 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTN 318
Fly 319 AALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYM--AKRIQMRKQRFMAIQKIAEQKKQQLDG 381
Fly 382 ANQQQANPNPNANVGGPGGVGVGPGGPGGPGGGVNVGVGMGMGPEHGHGHGHHAHSHGHPHAPKQ 446
Fly 447 TVSNRPIGFSNIQQNVGTRGCSIVGPLFQEVRFKVHDPKA-----------HSKGGTLENTVNGG 500
Fly 501 RGGPQSHGPGPGQGGGPPGGGGGGGGGGGPPEGGGD--PEAAVPAHLLH-PGKVK--------KV 554
Fly 555 KDINKLLGITPSDIDKYSRIVFPVCFVCFNLMYWIIYLH 593 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 72/182 (40%) |
Neur_chan_memb | 274..588 | CDD:397193 | 88/337 (26%) | ||
gabrb1 | XP_012811146.2 | LIC | 9..475 | CDD:273305 | 175/555 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D226476at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |