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Protein Alignment Rdl and gabrb2b
DIOPT Version :9
Sequence 1: | NP_001261617.1 |
Gene: | Rdl / 39054 |
FlyBaseID: | FBgn0004244 |
Length: | 608 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_005174507.3 |
Gene: | gabrb2b / 100332196 |
ZFINID: | ZDB-GENE-111215-5 |
Length: | 191 |
Species: | Danio rerio |
Alignment Length: | 124 |
Identity: | 51/124 - (41%) |
Similarity: | 78/124 - (62%) |
Gaps: | 5/124 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 58 NISAI---LDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRL 119
|:|.: :|.....||.|:||::|||||.||:.:.:.||..:|||.||:||..||:|.|.|.||
Zfish 70 NMSLVKETVDRLLKGYDIRLRPDFGGPPVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRL 134
Fly 120 AYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIR 178
:|.:.| ..|::.:.....:|||||:|:|:|:|:.|..|..|..||:|..|::...:|
Zfish 135 SYSEIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 191
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D226476at33208 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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