Sequence 1: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001096164.1 | Gene: | gabrb3 / 100124708 | XenbaseID: | XB-GENE-6030743 | Length: | 475 | Species: | Xenopus tropicalis |
Alignment Length: | 584 | Identity: | 183/584 - (31%) |
---|---|---|---|
Similarity: | 278/584 - (47%) | Gaps: | 154/584 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 50 GGSMLGDVNISAIL----------------------DSFSVSYDKRVRPNYGGPPVEVGVTMYVL 92
Fly 93 SISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHI 157
Fly 158 ATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLS 222
Fly 223 SVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWV 287
Fly 288 SFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVG 352
Fly 353 YM--AKRIQMRKQRFMAIQKIAEQKKQQLDGANQQQANPNPNANVGGPGGVGVGPGGPGGPGGGV 415
Fly 416 NVGVGMGMGPEHGHGHGHHAHSHGHPHAPKQTVSNRPIGFSNIQQNVGTRGCSIVGPLFQEVRFK 480
Fly 481 VHDPK-----------AHSKGGTLENTVNGGRGGPQSHGPGPGQGGGPPGGGGGGGGGGGPPEGG 534
Fly 535 GDPEAAVPAHLLHPGKVKKVK-----DINKLLGITPSDIDKYSRIVFPVCFVCFNLMYWIIYLH 593 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 73/182 (40%) |
Neur_chan_memb | 274..588 | CDD:397193 | 90/331 (27%) | ||
gabrb3 | NP_001096164.1 | LIC | 11..473 | CDD:273305 | 179/575 (31%) |
Neur_chan_LBD | 41..243 | CDD:280998 | 83/203 (41%) | ||
Neur_chan_memb | 250..470 | CDD:280999 | 90/331 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D226476at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |