DRSC/TRiP Functional Genomics Resources

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Protein Alignment nwk and SHO1

DIOPT Version :10

Sequence 1:NP_001286994.1 Gene:nwk / 39052 FlyBaseID:FBgn0263456 Length:1075 Species:Drosophila melanogaster
Sequence 2:NP_011043.1 Gene:SHO1 / 856854 SGDID:S000000920 Length:367 Species:Saccharomyces cerevisiae


Alignment Length:247 Identity:54/247 - (21%)
Similarity:86/247 - (34%) Gaps:88/247 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 SLRDSGQRTDPNDPNGPDLDTKIEEFRDQIRRSETEKTKAEACLQCLRDGGINVDEWVQEAENM- 423
            ::||||..            |:.:.:..| :.|.|....:.|..     |..|......||.|: 
Yeast   194 AIRDSGYA------------TQFDGYPQQ-QPSHTNYVSSTALA-----GFENTQPNTSEAVNLH 240

  Fly   424 --GVQELTRSASSISMRTDASGQGENPSSDSFYDSDKEETQAAAQTKPKQEQQLSRDRTFSDSED 486
              .:|:...|||:.....|.|....|.:..:.:|:|                       ||:...
Yeast   241 LNTLQQRINSASNAKETNDNSNNQTNTNIGNTFDTD-----------------------FSNGNT 282

  Fly   487 EPEVRPSAAAASSAAAASSSMMASSAGGWDDPTEVNWGAGEEEDDKDEPIVPEPKEAIFKCTALY 551
            |                  :.|..:.|.:.|..:.|:                    |:|..|||
Yeast   283 E------------------TTMGDTLGLYSDIGDDNF--------------------IYKAKALY 309

  Fly   552 SYTAQNPD--ELTIVENEQLEVVGEGDGDG-WLRARNYRGEEGYVPHNYLDI 600
            .|.|.:.|  |::..:||.|:|   .|.:| |.:||...||.|.:|.||:.:
Yeast   310 PYDADDDDAYEISFEQNEILQV---SDIEGRWWKARRANGETGIIPSNYVQL 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwkNP_001286994.1 BAR 16..281 CDD:472257
SH3_FCHSD_1 545..600 CDD:212695 23/57 (40%)
YgiM <562..668 CDD:442337 15/40 (38%)
SH3 663..718 CDD:473055
PRK12323 <725..956 CDD:481241
SHO1NP_011043.1 SH3_Sho1p 304..358 CDD:212789 23/56 (41%)
Blue background indicates that the domain is not in the aligned region.

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