DRSC/TRiP Functional Genomics Resources

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Protein Alignment nwk and srgap1b

DIOPT Version :9

Sequence 1:NP_001286994.1 Gene:nwk / 39052 FlyBaseID:FBgn0263456 Length:1075 Species:Drosophila melanogaster
Sequence 2:XP_005164640.1 Gene:srgap1b / 555788 ZFINID:ZDB-GENE-041210-103 Length:1071 Species:Danio rerio


Alignment Length:1202 Identity:211/1202 - (17%)
Similarity:389/1202 - (32%) Gaps:389/1202 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VKFLKNLHTEQVAKLQLKNQHECDLLEDIRQFTIKRSAVEKSYSESLLKISSQYLNKKIPNIPDI 75
            ||.:::...||...|:.:......||:|::.|..|::.:|..||.:|.|::.::: .|..:..|.
Zfish    21 VKEIRSQLVEQQKCLEQQTDMRVQLLQDLQDFFRKKAEIESEYSRNLEKLAERFM-AKTRSTKDH 84

  Fly    76 KMEGMEERWNMWS---VWRTVLEENEKLARARLAAIEVFQQQIADEAKVLRDYKLAIAKRSLAGI 137
            :....::  |:.|   .|..:|.:..:.::......:::...:......:.:..:.:.|:|...|
Zfish    85 QQYKKDQ--NLLSPVNCWYLLLNQVRRESKDHATLSDLYLNNVITRFTHVSEDNMRLLKKSKEII 147

  Fly   138 VNVQKELHLSVGDVDKTKKSYFDEEHCAHDVRDKARDIEEKLK------KKKGSFFQSITSL--- 193
            ..:|::|...:.::....|:|       |....:....|.|||      :::|...:::.||   
Zfish   148 FQLQEDLMKILNELYTVMKTY-------HMYHTETLSAENKLKEAERQGERQGRGGEAVFSLRTE 205

  Fly   194 ----QKNSAR-VTSRKELLEEKSS-------GARNDYVLSLAAANAHQNRYFTVDLQTTMTTMEN 246
                ::|:|| :...||..:.|.|       .|||:|:|:|.|.||...:|:..||         
Zfish   206 DRHQRRNAARKIQKMKEKRQAKYSENKLKVMKARNEYLLTLEATNASLFKYYIHDL--------- 261

  Fly   247 YVFERVAEYLMLMGRTELLTCSATQNSFGKIRDQAQQLTREYNLQCC-YLFYPVLKQHIQ----- 305
                           :.|..|.......|..|.....|:.||:|:.. :....:|:..::     
Zfish   262 ---------------SHLTDCCDLGYHAGLSRALRTYLSAEYSLETSRHEGLDILEGAVEGLDPG 311

  Fly   306 -------------------YDFEACDNDPVRKVTAEHESAAETL--------------------- 330
                               :.|:....|.|.::||..:..||.|                     
Zfish   312 NDRQRFMETHPTSFTPPTRFTFQPHMGDQVSQITALPQVQAELLLRFQQLQSRLSTLKIENEEVK 376

  Fly   331 -TKEA--KNLAGRVVKENASIRENAKKLALCQSLRDSGQRTDPNDPN------------------ 374
             |.||  ..:...|..|:..:.|:.:.....:|::.|...|..:.|:                  
Zfish   377 KTSEATLSTIQDMVNMEDYDVSESFQHSRSTESVKSSVSDTYLSKPSLAKRRANQQETELFYFTK 441

  Fly   375 ------GPDLDTKIEEFRDQIRRSETEKTKA--------------------------EACLQCLR 407
                  |.:|..|::...|.::||..|..:|                          |:|::.:.
Zfish   442 LKEYLEGSNLIAKLQAKHDMLKRSIAEGYRADIMTTSRRRNSHSRNQDSGKAIPLIVESCIRFIN 506

  Fly   408 DGGINVDEWVQEAENMGVQELTRSASSISMRTDASGQGENPSSDSFYDSD--------------- 457
            ..|:         ::.|:..::.|...::...::..:|.:|.:|...:.|               
Zfish   507 LYGL---------QHQGIFRVSGSQVEVNDIKNSFERGNDPLTDEENNHDINSVAGVLKMYFRNL 562

  Fly   458 ------KEETQ---AAAQTKPKQEQQLSRDRTFSDSEDEPEVRPSAAAASSAAAASSSMMASSAG 513
                  ||:..   |..:|:...|:.||..:..:...     ||:........|..:.:...|..
Zfish   563 DNPIFPKEKFNDLIACVRTESLYERALSIRKILTTMP-----RPTLVLMRYLFAFLNHLSQYSDE 622

  Fly   514 GWDDP------------------TEVNWGAGEEEDDK-----DEPIVPEPKE----AIFKCTALY 551
            ...||                  .:|:..|...|..|     .|.|.|:.||    ...||.:..
Zfish   623 NMMDPGNLAICFGPTLMPTPDLLDQVSCQAHVNEIVKTIIIHHETIFPDTKELEGPVYEKCMSNT 687

  Fly   552 SYTAQNPDELTIVENEQLEVVGEGDGDGWLRARNYRGEEGYVPHNYLDIDQETAGSAFNGTSGNQ 616
            .|......|....|        ||:.||                               ||    
Zfish   688 EYCESPYSEPGAFE--------EGEQDG-------------------------------GT---- 709

  Fly   617 LRSQISFSSVDYTVDNEDQTVDSMQSPDQVSVIMAPQKRVKSDVEWCIALYDYDATAEDELTFEE 681
                            |.||.:....|                || .||.:||...:..||||::
Zfish   710 ----------------ETQTSEEEGEP----------------VE-AIAKFDYVGRSGRELTFKK 741

  Fly   682 GDKIKIITKTAHGVDDGWWEGELDGKFGNFPS--LVVEECDEMGEPLSEGGDESPPPTAAP---- 740
            |..:.:..:.:    :.||||..:|..|..|.  :.::|.:.|.:.||:..|.....|.:.    
Zfish   742 GSTLLLFQRAS----EDWWEGRHNGTDGLIPHQYVTLQEDEAMSDTLSQKTDSEASTTPSDEVSS 802

  Fly   741 --TFALPPAPALPPEYAHELELELTEDMFGSQDTADEDSGYIPNGAAAPSIPPPVLI-------- 795
              :...|..|.:|..:... ..:.||.:.........|:....||....|  |||.:        
Zfish   803 RRSLTSPTEPRIPETFISR-HRKRTEALLRRVPGRLSDNHCHGNGLERSS--PPVTVTVTGHFSP 864

  Fly   796 -----------------QEPGM--------------EDDLSDDGQPPPSLPPPQLAKAGGSAPGS 829
                             :.||:              .:.|..:.:.||....|.....|.....|
Zfish   865 RELLRGNSCALDSPEHHRRPGLNGSSNGNITSSISRHESLRRERESPPIRQSPSALHCGLPIQRS 929

  Fly   830 GSKVEKGAAAGGANTLNLGMAQII-------VTAATPMVEDGAD--KSFP--PVGESDAQPVEPV 883
            .:......|.....|::|.:.::.       .|||..:|.|..:  ||.|  |.|.:.:....|.
Zfish   930 QTLNPHTMAQDIEETMSLALNELRELERQNGKTAAPDLVLDTLEQVKSSPSCPSGSTPSSLSSPS 994

  Fly   884 SKEQP-AEVAKKPDIAPKPLAKVAPQSAPAKEGNAGVRPVVS----ITLTEYPSCDAEDQQSFSE 943
            ....| :.::..|.:.|.|    .|.|....:..|..:|:.|    :||.. |:...:.      
Zfish   995 DSPSPLSPISPLPPLPPLP----GPSSRRTNDLVATFKPIASPRMGVTLRP-PALRPKP------ 1048

  Fly   944 GTDSASVADVPVLQDAEDPFNEKAKGESGDGS 975
                      |:|..|..|.:::.:.....|:
Zfish  1049 ----------PILPKANPPPSQQPQNPDKSGT 1070

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwkNP_001286994.1 BAR 16..281 CDD:353336 57/288 (20%)
SH3_FCHSD_1 545..600 CDD:212695 9/54 (17%)
SH3 663..718 CDD:354299 16/56 (29%)
PRK12323 <725..956 CDD:237057 51/291 (18%)
srgap1bXP_005164640.1 BAR 26..277 CDD:299863 56/284 (20%)
RhoGAP_srGAP 480..664 CDD:239848 26/197 (13%)
SH3 722..772 CDD:302595 17/54 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3565
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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