DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nwk and trip10a

DIOPT Version :9

Sequence 1:NP_001286994.1 Gene:nwk / 39052 FlyBaseID:FBgn0263456 Length:1075 Species:Drosophila melanogaster
Sequence 2:XP_017209563.1 Gene:trip10a / 492762 ZFINID:ZDB-GENE-041114-105 Length:592 Species:Danio rerio


Alignment Length:656 Identity:132/656 - (20%)
Similarity:237/656 - (36%) Gaps:151/656 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 EQVAKLQLKNQHECDLLEDIRQFTIKRSAVEKSYSESLLKISSQYLNKKIPNIPDIKMEGMEERW 84
            :|...|....|...||::...:|..:|:.:|::|::.|..::.:|..|:      ...|..|.|:
Zfish     9 DQYDILDKHTQSGLDLVDKYMKFVKERTDIEQNYAKQLRNLTKKYSPKR------GSKEEQECRF 67

  Fly    85 NMWSVWRTVLEE-------NEKLARARLAAIEVFQQQIADEAKVLRDYKLAIAKRSLAGIVNVQK 142
            :....:..:|.|       .|.:|...:..|.|...:...|.|..|...|:.||:|       |:
Zfish    68 SNHQAFLDILNEMNDYAGQRELIAENMMINICVELNKYLQELKQERKMHLSEAKKS-------QQ 125

  Fly   143 ELHLSVGDVDKTKKSYFDEEHCAHDVRDKARDIEEKLKKKKGSFFQSITSLQKNSARVTSRKELL 207
            .|......:|.:||.:..|...|......|...::.|...|       ..::|...:...|..:.
Zfish   126 SLEAMYKQLDNSKKRFEREWREAEKAAQYADKTDQDLNATK-------ADVEKAKQQAHLRTHIA 183

  Fly   208 EEKSSGARNDYVLSLAAANAHQNRYFTVDLQ---TTMTTMENYVFERVAEYLMLMGRTELLTCSA 269
            |:    .:|||.:.|...|..|::::..|:.   ..:..|:....:::|:..:|...||    ..
Zfish   184 ED----CKNDYAVQLQKYNKEQSQFYFTDMPQIFNKLQDMDERRIKKMAQGYILFAETE----RH 240

  Fly   270 TQNSFGKIRDQAQQLTREYNLQCCYLFYPVLKQHI-------QYDFEACDNDPVRKVTAEHESAA 327
            .....||..:...:.....|.:...:.  :::||.       ..|||.......|   |..:|:.
Zfish   241 VMPIIGKCLEGMTRAGTNVNARNDSMV--LIEQHKSGFERPGDLDFEDYSQGINR---ASSDSSL 300

  Fly   328 ETLTKEAKNLAGRVVKENASIRENAKKLAL-CQSLRDSGQRTDPNDPNGP--------------- 376
            .| .|....|.|:  .:|.:.|...||..| ..||........|:..|||               
Zfish   301 GT-PKGPLELLGK--NKNKTFRLFNKKSKLPSSSLSPYSTPPIPSPANGPPSPKFGRDPLSYCLK 362

  Fly   377 ----DLDTKIEEFRDQIRRS--ETE-------KTKAEACLQCLRDGGINVDEWVQEAENMG---- 424
                .:..:|..|| .::|:  :||       :.:.:...|.:.|....:.:.:.::|.:|    
Zfish   363 EINKTVKPRISSFR-TLKRTPVDTEGFTHLPPEQRRKRLQQKIDDMSKELQKEMDQSEALGKMKD 426

  Fly   425 ---------------------VQELTRSASSI----SMRTDASGQGENPSSDSFYDSDKEETQAA 464
                                 .|.:.|....:    |...:|.|:|         ||.:..|.:.
Zfish   427 VYEKNPQMGDPASLAPQIGQTAQNMDRLRGELNKYESWLAEAGGRG---------DSIRYSTHSI 482

  Fly   465 AQTKPKQEQQLSRDRTFSDSEDEPEVRPSAAAASSAAAASSSMMASSAGGWDDPTEVNWGAGEEE 529
            .                ::....|.....:....|..|.|..         .||::..:...::|
Zfish   483 N----------------NNGAHNPNSNDGSCTLFSPGALSDE---------TDPSQAIYTEFDDE 522

  Fly   530 DDKDEPIVPEPKEAIFKCTALYSYTAQNPDELTIVENEQLEVVGEGDGDGWLRARNYRGEEGYVP 594
            .:::|...|     |.:|||||::...:...:::.|.|.|.||.|..||||.|.|...|:|||:|
Zfish   523 FEEEELATP-----IGQCTALYNFPGSSEGTISMQEGEVLAVVEEDKGDGWTRVRRNNGDEGYIP 582

  Fly   595 HNYLDI 600
            .:|..|
Zfish   583 TSYATI 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwkNP_001286994.1 BAR 16..281 CDD:353336 55/270 (20%)
SH3_FCHSD_1 545..600 CDD:212695 23/54 (43%)
SH3 663..718 CDD:354299
PRK12323 <725..956 CDD:237057
trip10aXP_017209563.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3565
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D348563at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.