DRSC/TRiP Functional Genomics Resources

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Protein Alignment nwk and Cip4

DIOPT Version :10

Sequence 1:NP_001286994.1 Gene:nwk / 39052 FlyBaseID:FBgn0263456 Length:1075 Species:Drosophila melanogaster
Sequence 2:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster


Alignment Length:34 Identity:11/34 - (32%)
Similarity:18/34 - (52%) Gaps:2/34 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 EEVKTEQAKEESPVEEAVSVVEEKSESAPESTEV 78
            |||...:.|.:  ||...:.|.|::|.|.|..::
  Fly   110 EEVSKYKGKRD--VESLKAFVVEETEKAAEKAQL 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwkNP_001286994.1 BAR 16..281 CDD:472257 11/34 (32%)
SH3_FCHSD_1 545..600 CDD:212695
YgiM <562..668 CDD:442337
SH3 663..718 CDD:473055
PRK12323 <725..956 CDD:481241
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 11/34 (32%)
HR1_CIP4-like 412..488 CDD:212009
SH3_CIP4-like 603..661 CDD:212844
Blue background indicates that the domain is not in the aligned region.

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