DRSC/TRiP Functional Genomics Resources

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Protein Alignment nwk and Srgap2

DIOPT Version :9

Sequence 1:NP_001286994.1 Gene:nwk / 39052 FlyBaseID:FBgn0263456 Length:1075 Species:Drosophila melanogaster
Sequence 2:XP_006249844.1 Gene:Srgap2 / 360840 RGDID:1566016 Length:1071 Species:Rattus norvegicus


Alignment Length:1168 Identity:231/1168 - (19%)
Similarity:388/1168 - (33%) Gaps:376/1168 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VKFLKNLHTEQVAKLQLKNQHECDLLEDIRQFTIKRSAVEKSYSESLLKISSQYLNKKIPNIPDI 75
            ||.::...|||:..|..:.:....||:|::.|..|::.:|..||.:|.|::.::|.|    ....
  Rat    21 VKEIRAQLTEQMKCLDQQCELRVQLLQDLQDFFRKKAEIEMDYSRNLEKLAERFLAK----TRST 81

  Fly    76 KMEGMEERWNMWS---VWRTVLEENEKLARARLAAIEVF-------------------------Q 112
            |.:..::..|:.|   .|..:|.:.::.:|......:::                         .
  Rat    82 KDQQFKKDQNVLSPVNCWNLLLNQVKRESRDHTTLSDIYLNNIIPRFVQVSEDSGRLFKKSKEVG 146

  Fly   113 QQIADE-AKVLRDYKLAIAKRSLAGIVNVQKELHL----SVGDVDKTKKSYFDEE-HCAHDVRDK 171
            ||:.|: .|||.:            :.:|.|..|:    |:....|.|::...|| .....|:.:
  Rat   147 QQLQDDLMKVLNE------------LYSVMKTYHMYNADSISAQSKLKEAEKQEEKQIGKSVKQE 199

  Fly   172 ARD------------IEEKLKKKKGSFFQSITSL-QKNSARVTSRKELLEEKSSGARNDYVLSLA 223
            .|.            ||||..::  |..:.|..: :|..|:.|..|    .|:..|||:|:|:|.
  Rat   200 DRQTPRSPDSTANVRIEEKHVRR--SSVKKIEKMKEKRQAKYTENK----LKAIKARNEYLLALE 258

  Fly   224 AANAHQNRYFTVDLQTTM-------------TTMENYVFERVAEYLMLMGRTELLTCSATQNSFG 275
            |.||...:|:..||...:             ..:..::   .||..:...:.|.|  .|.:|:..
  Rat   259 ATNASVFKYYIHDLSDIIDQCCDLGYHASLNRALRTFL---SAELNLEQSKHEGL--DAIENAVE 318

  Fly   276 KI--RDQAQQLTREYNLQCCYLFYPVLKQHIQYDFEACDNDPVRKVTAEHESAAETLTKEAKNLA 338
            .:  ....|:|...||    .:|.|.:|    ::|:....|...::.|:....:| |.:..:.|.
  Rat   319 NLDATSDKQRLMEMYN----NVFCPPMK----FEFQPHMGDMASQLCAQQPVQSE-LVQRRQQLQ 374

  Fly   339 GRVVKENASIRENAKKLALCQSLRDSGQRTDPNDPNGPDLDT-KIEEFRDQIRRSETEKTKAEAC 402
            .|                                     |.| |||       ..|.:|| .||.
  Rat   375 SR-------------------------------------LSTLKIE-------NEEVKKT-MEAT 394

  Fly   403 LQCLRD----GGINVDEWVQEAENMGVQELTRSASSISMRTDASGQGENPSSDSFYDSDKEE--- 460
            ||.::|    ...:|.:..|.:.:|...:.|.|.:.:|..:.|..:.....::.||.:..:|   
  Rat   395 LQTIQDIVTVEDFDVSDCFQYSNSMESVKSTVSETFMSKPSIAKRRANQQETEQFYFTKMKEYLE 459

  Fly   461 -----TQAAAQ----TKPKQEQQ-----LSRDRTFSDSEDEPEVRPSAA---------------- 495
                 |:..|:    .|...|.|     |:|..:....:|..:..|...                
  Rat   460 GRNLITKLQAKHDLLQKTLGESQRTDCSLARRSSTVRKQDSSQAIPLVVESCIRFISRHGLRHEG 524

  Fly   496 ---AASSAAAASSSMMASSAGGWDDPTEVNWGAGEEED-DKD--------------EPIVPE--- 539
               .:.|....:....|...|  :||.     ||::.| |.|              .|:.|:   
  Rat   525 VFRVSGSQVEVNDIKNAFERG--EDPL-----AGDQNDHDMDSIAGVLKLYFRGLEHPLFPKDIF 582

  Fly   540 --------------------------PKEAIFKCTALYSY----------TAQNPDELTIVENEQ 568
                                      ||..:.....|:::          ...:|..|.|.....
  Rat   583 HDLIACVTMDNLQERAVHIRKVLLVLPKPTLIIMRYLFAFLNHLSQFSEENMMDPYNLAICFGPS 647

  Fly   569 LEVVGEGDGDGWLRAR-NYRGEEGYVPH-NYLDIDQETAGSAF----------NGTSGNQLRSQI 621
            |..|.||......:|. |...:...:.| |.....:|..|..:          :.|.|..:.::.
  Rat   648 LMSVPEGHDQVSCQAHVNELIKTIIIQHENIFPNPRELEGPIYSRGGSMEDYCDSTHGETISAED 712

  Fly   622 SFSSVDYTVDNEDQTVDSMQSPDQVSVIMAPQKRVKSDVEWCIALYDYDATAEDELTFEEGDKIK 686
            |         .:|.|.:...|.|:...|.|            ||.:||......||:|::|..:.
  Rat   713 S---------TQDVTAEHHTSDDECEPIEA------------IAKFDYVGRTARELSFKKGASLL 756

  Fly   687 IITKTAHGVDDGWWEGELDGKFGNFPS--LVVEECD----EMGEPLSEGGDESPPPTAAPTFALP 745
            :..:.:    |.||||..:|..|..|.  :||::.:    |...|.||....|.||....|   .
  Rat   757 LYQRAS----DDWWEGRHNGIDGLIPHQYIVVQDTEDGVVERSSPKSEIEVMSEPPEEKVT---A 814

  Fly   746 PAPALPPEYAHELELELTEDMFGSQDTADEDSGYIPNGAAAPSIPPPVLIQEPGMEDDLSDDGQP 810
            ...|..|...|..::.|...   ::.....:||.|.....:.|         .|:...|:|...|
  Rat   815 RTGASCPSGGHVADIYLANI---NKQRKRPESGSIRKAFRSDS---------HGLGSSLTDSSSP 867

  Fly   811 -------PPSLP--PPQLAKAGG-----SAPGSGSKVEKGAAAGGANTLNLGMAQIIVTAATPMV 861
                   |.|.|  ...|.|.|.     |..||.:.:.:.::...    .:...||..||..   
  Rat   868 GVGASCRPSSQPIMSQNLPKEGPDKCSISGHGSLNSISRHSSLKN----RMDSPQIRKTATA--- 925

  Fly   862 EDGADKSF----PPVGESDAQPVEPVSK---------EQPAEVAKKPDI---APKPLAKVAPQSA 910
              |..|||    |...|..||.:|....         |:.:.....||:   ..:|| |.:|..|
  Rat   926 --GRSKSFNNHRPMDPEVIAQDIEATMNSALNELQELERQSSAKHTPDVVLDTLEPL-KTSPVVA 987

  Fly   911 PAKEGNAGVRPVVSITLTEYPSCDAEDQQSFSEGTDSASVADVPVLQDAEDPFNEKAKGESGD 973
            |..|                ||.....|                :|:|.|..| :::...:||
  Rat   988 PTSE----------------PSSPLHTQ----------------LLKDPEPAF-QRSASTAGD 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwkNP_001286994.1 BAR 16..281 CDD:353336 67/326 (21%)
SH3_FCHSD_1 545..600 CDD:212695 12/66 (18%)
SH3 663..718 CDD:354299 18/56 (32%)
PRK12323 <725..956 CDD:237057 54/260 (21%)
Srgap2XP_006249844.1 F-BAR_srGAP2 26..289 CDD:153366 61/284 (21%)
RhoGAP_srGAP 487..674 CDD:239848 28/193 (15%)
SH3_srGAP1-3 732..784 CDD:212888 17/67 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3565
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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