DRSC/TRiP Functional Genomics Resources

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Protein Alignment nwk and Fchsd2

DIOPT Version :10

Sequence 1:NP_001286994.1 Gene:nwk / 39052 FlyBaseID:FBgn0263456 Length:1075 Species:Drosophila melanogaster
Sequence 2:XP_008757943.2 Gene:Fchsd2 / 308864 RGDID:1304812 Length:764 Species:Rattus norvegicus


Alignment Length:862 Identity:271/862 - (31%)
Similarity:407/862 - (47%) Gaps:187/862 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQPPPRKGNYVKFLKNLHTEQVAKLQLKNQHECDLLEDIRQFTIKRSAVEKSYSESLLKISSQYL 65
            |||||||....:.|:|:..||:.|||.|:|.|||||||:|.|:.|::|:|:.|::.:.|::||||
  Rat     1 MQPPPRKVKVTQELRNIQGEQMTKLQAKHQAECDLLEDMRTFSQKKAAIEREYAQGIQKLASQYL 65

  Fly    66 NKKIPNIPDIKMEGMEERWNMWSVWRTVLEENEKLARARLAAIEVFQQQIADEAKVLRDYKLAIA 130
            .:   :.|.||.:...:..:|:.||::.||...::|::|:...|.::..|::.|:.:|..|....
  Rat    66 KR---DWPGIKTDDRNDYRSMYPVWKSFLEATMQVAQSRINICENYKNFISEPARAVRSLKEQQL 127

  Fly   131 KRSLAGIVNVQKELHLSVGDVDKTKKSYFDEEHCAHDVRDKARDIEEKLKKKKGSFFQSITSLQK 195
            ||.:..:..:|.||..:|.|:.|.||.||:.|..||.||:|| |||   .|.|.|.|||..||||
  Rat   128 KRCVDQLTKIQTELQETVKDLVKGKKKYFETEQMAHAVREKA-DIE---AKSKLSLFQSRISLQK 188

  Fly   196 NSARVTSRKELLEEKSSGARNDYVLSLAAANAHQNRYFTVDLQTTMTTMENYVFERVAEYLMLMG 260
            .|.::.:|:.....|::.|||||:|:||||||||:||:..||...|..::..|::.:.:||:...
  Rat   189 ASVKLKARRTECNTKATHARNDYLLTLAAANAHQDRYYQTDLLNIMKALDGNVYDHLKDYLIAFS 253

  Fly   261 RTELLTCSATQNSFGKIRDQAQQLTREYNLQCCYLFYPVLKQHIQYDFEACDND----------- 314
            ||||..|.|.||:|..:.:.:.::.|:||||.......|..:...:.|:.||:|           
  Rat   254 RTELEACQAMQNTFQFLLENSSKVVRDYNLQLFLQENAVFHKPQPFQFQPCDSDTSLKAAQLVDI 318

  Fly   315 ---PV----------RKVTAEHESAAE-TLTKEAKNLAGRVVKENASIRENAKKL--ALCQSLRD 363
               ||          |::.:|..:..| :|.|||:..|.||.:|:.:|....:.|  ..|..:..
  Rat   319 ELSPVSALRMTIAESRQLESETGTTEEHSLNKEARKWATRVAREHKNIVHQQRVLNELECHGVAV 383

  Fly   364 SGQRTDPNDPNGPDLDTKIEEFRDQIRRSETEKTKAEACLQCLRDGGINVDEWVQEAENMGVQEL 428
            |.|       :..:|:.||:|.|:.||::|..|.||||.|..|:..|::||.|::.|.|..::||
  Rat   384 SEQ-------SRAELEQKIDEARENIRKAEIIKLKAEARLDLLKQIGVSVDTWLKSAMNQVMEEL 441

  Fly   429 -----------TRSASSISMRTDASGQGENPSSDSFYDSDKEETQAAAQTKPKQEQQLSRDRTFS 482
                       |.:.:..|:..||    |....:.|.|:..                     .|.
  Rat   442 ENERWARPPAVTSNGTLHSLNADA----EREEGEEFEDNMD---------------------VFD 481

  Fly   483 DSEDEPEVRPSAAAASSAAAASSSMMASSAGGWDDPTEVNWGAGEEEDDKDEPIVPEPKEAIFKC 547
            ||...|               |.::                        ::.|:.         |
  Rat   482 DSSSSP---------------SGTL------------------------RNYPLT---------C 498

  Fly   548 TALYSYTAQNPDELTIVENEQLEVVGEGDGDGWLRARNYRGEEGYVPHNYLDIDQETAGSAFNGT 612
            ..:|||.|..||||||.|:|.|||:.:||.:.|::|||..|:.||||..||..           .
  Rat   499 KVVYSYKASQPDELTIEEHEVLEVIEDGDMEDWVKARNKVGQVGYVPEKYLQF-----------P 552

  Fly   613 SGNQLRSQISFSSVDYTVDNEDQTVDSMQSPDQVSVIMAPQKRVKSDVEWCI--ALYDYDATAED 675
            :.|.|.|.:...:   .:|:...|..:....:.||      ..:..|...|.  |||||:...:|
  Rat   553 TSNSLLSMLQSLA---ALDSRSHTSSNSTEAELVS------GSLNGDASVCFVKALYDYEGQTDD 608

  Fly   676 ELTFEEGDKIKIITKTAHGVDDGWWEGELDGKFGNFPSLVVEECDEMGEPLSEGGDE-------- 732
            ||:|.||..|:|:.|.... |||:||||..|:.|.|||::|||..     .||.||.        
  Rat   609 ELSFPEGAIIRIVNKENQD-DDGFWEGEFSGRIGVFPSVLVEELS-----ASENGDTPWTRDIQV 667

  Fly   733 SPPPTAAPTFALPPAPAL--PPEYAHELELELTEDMF--------------------GSQDTADE 775
            ||.|  .|..:|||.|..  ||...:....:.:...|                    .|:.|.|.
  Rat   668 SPSP--KPHTSLPPLPLYDQPPSSPYPSPDKRSSQFFPRSPSANENCLHAESPGFSQASRQTPDT 730

  Fly   776 DSGYIPNGAAAPSIPPP 792
            ..|.:....|||  |||
  Rat   731 SYGKLRPVRAAP--PPP 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwkNP_001286994.1 BAR 16..281 CDD:472257 107/264 (41%)
SH3_FCHSD_1 545..600 CDD:212695 29/54 (54%)
YgiM <562..668 CDD:442337 31/107 (29%)
SH3 663..718 CDD:473055 28/56 (50%)
PRK12323 <725..956 CDD:481241 25/98 (26%)
Fchsd2XP_008757943.2 F-BAR_FCHSD2 16..275 CDD:153361 107/265 (40%)
SCP-1 <258..>447 CDD:114219 56/195 (29%)
SH3_FCHSD_1 495..551 CDD:212695 30/64 (47%)
SH3_FCHSD2_2 595..650 CDD:212827 27/55 (49%)

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