DRSC/TRiP Functional Genomics Resources

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Protein Alignment nwk and toca-1

DIOPT Version :9

Sequence 1:NP_001286994.1 Gene:nwk / 39052 FlyBaseID:FBgn0263456 Length:1075 Species:Drosophila melanogaster
Sequence 2:NP_741723.1 Gene:toca-1 / 180492 WormBaseID:WBGene00017298 Length:592 Species:Caenorhabditis elegans


Alignment Length:666 Identity:134/666 - (20%)
Similarity:234/666 - (35%) Gaps:204/666 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 DLLEDIRQFTIKRSAVEKSYSESLLKISSQYLNKKIPNIPDIKMEGMEERWNMWSVWR------- 91
            ||||.|..::.:|:::|..||..|     :.|:||..    :||:...|.||..|..:       
 Worm    26 DLLERIMAYSKERASIELEYSSKL-----KALSKKTA----MKMKSESELWNSVSYVKGFHDVIA 81

  Fly    92 ---TVLEENEKLA-RARLAAIEVFQQQIADEAKVLRDYKLAIAKRSL-AGIVNVQKELHLSVGDV 151
               .|..::|.:| ..:.|.|....|:||       :|:  :||:.| :...|:.|:|.:.:.::
 Worm    82 GIVPVATQHELIAENLKSAVIPFTTQKIA-------EYR--VAKKQLESDNSNLGKQLRMVIDEM 137

  Fly   152 DKTKKSY---FDEEHCA---HDVRDKARDIEE-KLKKKKGSFFQSITSLQKNSARVTSRKELLEE 209
            .|:.|.|   :.|...|   :...:|..||.. :|:|.|.::.|              :..:|||
 Worm   138 AKSHKEYVKCYKETEAAMLKYAKAEKNMDISRLELEKTKNNYQQ--------------KCGMLEE 188

  Fly   210 KSSGARNDYVLSLAAANAHQNRYFTVDLQTTMTTMENYVFERVAEYLMLMGRTELLTCSATQNSF 274
                ::..|.:....||..|:.::...|.   ..::||              .:|.|        
 Worm   189 ----SKQTYAVMTTKANEEQSAHYDRKLP---QLLDNY--------------KKLHT-------- 224

  Fly   275 GKIRDQAQQLTREYNLQCCYLFYPVLKQHIQYDFEACDNDPVRKVTAEHESAAETLTKE------ 333
            .:|.|..:.|::....:.|          :.....:|.||..|.:.....|....|..|      
 Worm   225 NRILDTVEILSKCVEAESC----------VNQIIASCHNDMRRDIGLIDPSRDANLVVENMKSGH 279

  Fly   334 ------------------------AKNLAGRVVKENASIR-------ENAKKLALCQSLRD---- 363
                                    |...||.:...:|:::       :|.|.:|..||:..    
 Worm   280 PVPQPFVFEDLGHPQDRSSFMGGGASGPAGSMDGMDATMKKGGTLMSKNGKGVARKQSMHQKFFG 344

  Fly   364 ---SGQRTDPNDPNGPDLDTKIEEFRDQIRRSETEKTKAEACLQCLRDGGINVDEWVQEAENMGV 425
               :.::||..|........:..:...:|...|.||.:|                          
 Worm   345 GGTADKKTDSGDYGTLPPQQRARKIAGKISDLEKEKDRA-------------------------- 383

  Fly   426 QELTRSASSISMRTDASGQGENPSSDSFYDSDKEETQAAAQTKPKQEQ-------------QLSR 477
               |:|...:|....|  ..|||...:..|.|.:..|...:......|             ||..
 Worm   384 ---TQSREGVSKMQAA--YRENPKLGNPSDCDAQLAQYGHEIDALSNQIQKFKILLDDVNAQLGA 443

  Fly   478 DRTFSDSEDEPEVRPSAAAASSAAAASSSMM---------------------ASSAGGWD-DPTE 520
            ....:.|....:..||..:.|||::..:|.:                     :.|.||.| ||| 
 Worm   444 GGLSATSVGGSDTPPSIRSVSSASSGVTSRVNTINDAHRTNGGVGGGRRESFSGSNGGSDTDPT- 507

  Fly   521 VNWGAGEEEDDKDEPIVPEPKEAIFKCTALYSYTAQNPDELTIVENEQLEVVGEGDGDGWLRARN 585
            :| |.|...|:..|. ...|...:.:..|.:::.......:.:..||:|.::.:.:||||.|.|.
 Worm   508 IN-GNGHGRDELYEE-CSNPNPVLGEAIAQFAFDGAQDGTIRMEANEKLWLIEKDEGDGWTRVRK 570

  Fly   586 YRGE-EGYVPHNYLDI 600
            .... :|:||.:||.:
 Worm   571 ENNSADGFVPSSYLKV 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwkNP_001286994.1 BAR 16..281 CDD:353336 60/265 (23%)
SH3_FCHSD_1 545..600 CDD:212695 15/55 (27%)
SH3 663..718 CDD:354299
PRK12323 <725..956 CDD:237057
toca-1NP_741723.1 F-BAR_CIP4-like 8..259 CDD:153337 66/303 (22%)
HR1_CIP4-like 362..438 CDD:212009 16/106 (15%)
SH3_CIP4-like 532..586 CDD:212844 15/53 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D348563at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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