DRSC/TRiP Functional Genomics Resources

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Protein Alignment nwk and Fnbp1

DIOPT Version :10

Sequence 1:NP_001286994.1 Gene:nwk / 39052 FlyBaseID:FBgn0263456 Length:1075 Species:Drosophila melanogaster
Sequence 2:XP_006497754.1 Gene:Fnbp1 / 14269 MGIID:109606 Length:649 Species:Mus musculus


Alignment Length:705 Identity:137/705 - (19%)
Similarity:243/705 - (34%) Gaps:185/705 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 EQVAKLQLKNQHECDLLEDIRQFTIKRSAVEKSYSESLLKISSQYLNKKIPNIPDIKMEGMEERW 84
            :|...|:...|...|:||...:|..:|:.:|.||::.|..:|.:|..||      ...|..|.::
Mouse     9 DQFDNLEKHTQWGIDILEKYIKFVKERTEIELSYAKQLRNLSKKYQPKK------NSKEEEEYKY 67

  Fly    85 NMWSVWRTVLEE-------NEKLARARLAAIEVFQQQIADEAKVLRDYKLAIAKRSLAGIVNVQK 142
            .....:.:.|.|       :|.::....:.|.|...:...|.|..|.......:::...|....|
Mouse    68 TACKAFLSTLNEMNDYAGQHEVISENMTSQITVDLMRYVQELKQERKSNFHDGRKAQQHIETCWK 132

  Fly   143 ELHLSVGDVDKTKKSYFDEEHCAHDVRDKARDIEEKLKKKKGSFFQSITSLQKNSARVTSRKELL 207
            :|       :.:|:.:  |..|..  .|:|:...||:...     .::|......||  .:.::.
Mouse   133 QL-------ESSKRRF--ERDCKE--ADRAQQYFEKMDAD-----INVTKADVEKAR--QQAQIR 179

  Fly   208 EEKSSGARNDYVLSLAAANAHQNRYFTVDLQTTMTTMENYVFERVAEYLMLMGRTELLTCSATQN 272
            ::.:..::.||.|.|...|..|..|:...:..        :|:::.|    |....::....:..
Mouse   180 QQMAEDSKADYSLILQRFNQEQWEYYHTHIPN--------IFQKIQE----MEERRIVRIGESMK 232

  Fly   273 SFGKIRDQ---------------AQQLTREYNLQCCYLFYPVLKQHIQ--YDFEACD-NDPVRKV 319
            ::.::..|               |:.:.::.:.|   |.....|...:  .|.|..| ..|:::.
Mouse   233 TYAEVDRQVIPIIGKCLDGIVKAAESIDQKNDSQ---LVVEAYKSGFEPPGDIEFEDYTQPMKRT 294

  Fly   320 TAEHESAAETLTKEAKNLAGRVVKENASIRENAKKLALCQSLRDSGQRTDPND--------PNGP 376
            .:::..::....|......|   |....:....||..|...|....|...|..        ||||
Mouse   295 VSDNSLSSSKEGKPELRFGG---KSRGKLWPFIKKNKLMSLLTSPHQPPPPPPASASPSAVPNGP 356

  Fly   377 D--------LDTKIEEFRDQIRRSETEKTKAEACLQCLRDG------------------------ 409
            .        |..:..||.       |.|.|.. |.:.|:.|                        
Mouse   357 QSPKQPKEPLSHRFNEFM-------TSKPKIH-CFRSLKRGTQSLCYHKELMKRTLGKPTHALEA 413

  Fly   410 ---------GINVDEW------------VQEAE--NMGVQELTRSASSISMRTDASGQGENPSSD 451
                     |:..:::            .|:.:  |..:|:.|....:|:...|.  ..:||...
Mouse   414 RDYVLSLKLGVTPEDFSNFPPEQRRKKLQQKVDDLNREIQKETDQRDAITKMKDV--YLKNPQMG 476

  Fly   452 SFYDSDKEETQAAAQTK--------------------PKQEQQLSRDRTFSDSEDEPEVRPSAAA 496
            .....|::.|:.....:                    |.:.:|..|.....|.:....|...|..
Mouse   477 DPASLDQKLTEVTQNIEKLRLEAQKFEAWLAEVEGRLPARSEQARRQSGLYDGQTHQTVTNCAQD 541

  Fly   497 ASSAAAASSSMMASS-------AGGWDDPTEVNWGAGEEEDDKDEPIVPEPKEAIFKCTALYSYT 554
            ..|:...|.:...|.       |..:||          |.||:      ||..||..|.|||::.
Mouse   542 RESSPDGSYTEEQSQESEHKVLAPDFDD----------EFDDE------EPLPAIGTCKALYTFE 590

  Fly   555 AQNPDELTIVENEQLEVVGEGDGDGWLRARNYRGEEGYVPHNYLDI--DQETAGS 607
            .||...:::||.|.|.|:.|..||||.|.|....||||||.:|:::  |:...|:
Mouse   591 GQNEGTISVVEGETLSVIEEDKGDGWTRIRRNEDEEGYVPTSYVEVYLDKNAKGA 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwkNP_001286994.1 BAR 16..281 CDD:472257 50/282 (18%)
SH3_FCHSD_1 545..600 CDD:212695 25/54 (46%)
YgiM <562..668 CDD:442337 21/48 (44%)
SH3 663..718 CDD:473055
PRK12323 <725..956 CDD:481241
Fnbp1XP_006497754.1 F-BAR_FBP17 5..257 CDD:153360 50/283 (18%)
HR1 434..510 CDD:469609 10/77 (13%)
SH3_FBP17 581..637 CDD:213004 25/55 (45%)
Blue background indicates that the domain is not in the aligned region.

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