DRSC/TRiP Functional Genomics Resources

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Protein Alignment nwk and Srgap1

DIOPT Version :9

Sequence 1:NP_001286994.1 Gene:nwk / 39052 FlyBaseID:FBgn0263456 Length:1075 Species:Drosophila melanogaster
Sequence 2:NP_001074506.1 Gene:Srgap1 / 117600 MGIID:2152936 Length:1085 Species:Mus musculus


Alignment Length:1144 Identity:211/1144 - (18%)
Similarity:387/1144 - (33%) Gaps:333/1144 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VKFLKNLHTEQVAKLQLKNQHECDLLEDIRQFTIKRSAVEKSYSESLLKISSQYLNKKIPNIPDI 75
            ||.::....||...|:.:.:....||:|::.|..|::.:|..||.:|.|::.:::.|........
Mouse    21 VKEIRAQLVEQQKCLEQQTEMRVQLLQDLQDFFRKKAEIETEYSRNLEKLAERFMAKTRSTKDHQ 85

  Fly    76 KMEGMEERWNMWSVWRTVLEE--NEKLARARLAAIEV------FQQQIADEAKVLRDYKLAIAKR 132
            :.:..:...:..:.|..:|.:  .|....|.|:.|.:      |.|...|..::.:..| .||.:
Mouse    86 QFKKDQNLLSPVNCWYLLLNQVRRESKDHATLSDIYLNNVIMRFMQISEDSTRMFKKSK-EIAFQ 149

  Fly   133 SLAGIVNVQKELHLSVGDVDKTKKSYFDEEHCAHDVRDKARDIEEKLKKKKGSFFQSITSLQKNS 197
            ....::.|..||:    .|.||...|..|...|.....:|...|||...:.|.....|...:::.
Mouse   150 LHEDLMKVLNELY----TVMKTYHMYHSESISAESKLKEAEKQEEKQIGRSGDPVFHIRLEERHQ 210

  Fly   198 ARVTSRK-ELLEE-----------KSSGARNDYVLSLAAANAHQNRYFTVDLQTTM--------- 241
            .|.:.:| |.::|           ||..|||:|:|:|.|.||...:|:..||...:         
Mouse   211 RRSSVKKIEKMKEKRQAKYSENKLKSIKARNEYLLTLEATNASVFKYYIHDLSDLIDCCDLGYHA 275

  Fly   242 ---TTMENYVFERVAEYLMLMGRTELLTCSATQNSFGKI--RDQAQQLTREYNLQCCYLFYPVLK 301
               ..:..|:   .|||.:...|.|.|  ...:|:...:  |...|:....|....|    |.:|
Mouse   276 SLNRALRTYL---SAEYNLETSRHEGL--DIIENAVDNLEPRSDKQRFMEMYPAAFC----PPMK 331

  Fly   302 QHIQYDFEACDNDPVRKVTAEHESAAETL----------------------TKEA--KNLAGRVV 342
                ::|::...|.|.:|:|:....||.:                      |.||  :.:...|.
Mouse   332 ----FEFQSHMGDEVCQVSAQQPVQAELMLRNQQLQSRLATLKIESEEVKKTTEATLQTIQDMVT 392

  Fly   343 KENASIRENAKKLALCQSLRDSGQRTDPNDPN------------------------GPDLDTKIE 383
            .|:..:.|..:.....:|::.:...|..:.|:                        |.:|.||::
Mouse   393 IEDYDVSECFQHSRSTESVKSTVSETYLSKPSIAKRRANQQETEQFYFMKLREFLEGSNLITKLQ 457

  Fly   384 EFRDQIRRSETEKTKA------------------------------------------------- 399
            ...|.::|:..|..:|                                                 
Mouse   458 AKHDLLQRTLGEGHRAEYMTTRPPNVPPKPQKHRKSRPRSQYNAKLFNGDLETFVKDSGQVIPLI 522

  Fly   400 -EACLQCLRDGGINVDEWVQEAENMGVQELTRSASSISMRTDASGQGENPSSDSFYDSDKEETQA 463
             |:|::.:...|:         ::.|:..::.|...::...::..:||||.||.  .|:.:....
Mouse   523 VESCIRFINLYGL---------QHQGIFRVSGSQVEVNDIKNSFERGENPLSDE--QSNHDINSV 576

  Fly   464 AAQTK-----------PKQE--QQLSRDRTFSDSEDEPEVRPSAAAASSAA--------AASSSM 507
            |...|           ||:.  ..:|..|..:..|....:|........:.        |..:.:
Mouse   577 AGVLKLYFRGLENPLFPKERFTDLISCIRIDNLYERALHIRKLLLTLPRSVLIVMRYLFAFLNHL 641

  Fly   508 MASSAGGWDDPTEVNWGAGEEEDDKDEPI---VPEPKEAIFKCTALYSYTAQNPDEL--TIVENE 567
            ...|.....||..:....|        |.   |||.::.: .|.|       :.:|:  ||:.:.
Mouse   642 SQYSDENMMDPYNLAICFG--------PTLMPVPEIQDQV-SCQA-------HVNEIVKTIIIHH 690

  Fly   568 QLEVVGEGDGDGWLRARNYRG----EEGYVPHNYL-DIDQETAGSAFNGTSGNQLRSQISFSSVD 627
            :.......:.||.:..:...|    :..|..|..| ::||:.      ||.             .
Mouse   691 ETIFPDAKELDGPVYEKCMAGGDYCDSPYSEHGTLEEVDQDA------GTE-------------P 736

  Fly   628 YTVDNEDQTVDSMQSPDQVSVIMAPQKRVKSDVEWCIALYDYDATAEDELTFEEGDKIKIITKTA 692
            :|.::|.:.:::                        ||.:||...:..||:|::|..:.:.    
Mouse   737 HTSEDECEPIEA------------------------IAKFDYVGRSARELSFKKGASLLLY---- 773

  Fly   693 HGVDDGWWEGELDGKFGNFPS--LVVEECDE-MGEPLSEGGDESPPPTAAPTFALPPAPALPPEY 754
            |...:.||||..:|..|..|.  :||::.|: ..:.||:..|..  .::.|              
Mouse   774 HRASEDWWEGRHNGIDGLVPHQYIVVQDMDDTFSDTLSQKADSE--ASSGP-------------- 822

  Fly   755 AHELELELTEDMFGSQD----TADEDSGYIPNGAAAPSIPPPVLIQEPGMEDDLSDDGQPPPSLP 815
                   :|||...|:|    |......|:........ |||     ||.....:.||..|  |.
Mouse   823 -------VTEDKSSSKDMNSPTDRHSDSYLARQRKRGE-PPP-----PGRRPGRTSDGHCP--LH 872

  Fly   816 PPQLAKAGGSAPGS-----------------GSKVEKGAAAGGANTLNLGMAQIIVTAATPMVED 863
            ||..........||                 ....|:....|..:..|:.....:....:|.:. 
Mouse   873 PPHALSNSSIDLGSPNLASHPRGLLQNRGLNNDSPERRRRPGHGSLTNISRHDSLKKIDSPPIR- 936

  Fly   864 GADKSFPPVGESDAQPVEPVSKEQPAE------------------VAKKPDIAPKPLAKVAPQSA 910
            .:..|....|.:|.:|::|.:..|..|                  |...||:....|.:|.....
Mouse   937 RSTSSGQYTGFNDHKPLDPETIAQDIEETMNTALNELRELERQSTVKHAPDVVLDTLEQVKNSPT 1001

  Fly   911 PAKEGNAGVRPVVSITLTEYPSCDAEDQQSFSEGTDSAS 949
            || .....:.|:.::.|.   ..:.:.::|.|..:::.|
Mouse  1002 PA-TSTESLSPLHNVALR---GSEPQIRRSTSSSSETMS 1036

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwkNP_001286994.1 BAR 16..281 CDD:353336 68/298 (23%)
SH3_FCHSD_1 545..600 CDD:212695 11/61 (18%)
SH3 663..718 CDD:354299 18/56 (32%)
PRK12323 <725..956 CDD:237057 47/264 (18%)
Srgap1NP_001074506.1 F-BAR_srGAP1 26..278 CDD:153367 59/256 (23%)
RhoGAP_srGAP 502..689 CDD:239848 34/213 (16%)
SH3_srGAP1-3 747..799 CDD:212888 16/79 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3565
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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