DRSC/TRiP Functional Genomics Resources

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Protein Alignment nwk and trip10b

DIOPT Version :9

Sequence 1:NP_001286994.1 Gene:nwk / 39052 FlyBaseID:FBgn0263456 Length:1075 Species:Drosophila melanogaster
Sequence 2:NP_956518.1 Gene:trip10b / 108179043 ZFINID:ZDB-GENE-040426-969 Length:512 Species:Danio rerio


Alignment Length:624 Identity:115/624 - (18%)
Similarity:221/624 - (35%) Gaps:164/624 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 EQVAKLQLKNQHECDLLEDIRQFTIKRSAVEKSYSESLLKISSQYLNKKIPNIPDIKMEGMEERW 84
            :|...::...|...||||...:|..:|:.:|::||:.|..:..:|..:......|.|:...:...
Zfish     9 DQHDAIERHTQSGLDLLERYMKFVKERAEIEQNYSKQLRNLCKKYTRRGSKEDQDTKLVSQQGFQ 73

  Fly    85 NMWSVWRTVLEENEKLARARLAAIEVFQQQIADEAKVLRDYKLAIAKRSLAGIVNVQKELHLSVG 149
            ::.........:.|:|:.:....|.|   :::.....||..:    |..||.|...|:.|..|..
Zfish    74 DVLCQLNDYAGQREQLSDSLTVGICV---ELSRSLTELRQER----KNHLAEIKKAQQNLESSFK 131

  Fly   150 DVDKTKKSYFDEEHCAHDVRDKARDIEEKLKKKKGSFFQSITSLQKNSARVTSRKELLEEKSSGA 214
            .::.:|:.:..|...|.....:...:|:.....|       ..:.|.......|....:|    .
Zfish   132 QLESSKRRFEKEWKEAEKANQQTEKVEQDASATK-------ADVDKAKQHANVRIHFADE----C 185

  Fly   215 RNDYVLSLAAANAHQNRYFTVDLQTTMTTMENYVFERVAEYLMLMGRTELLTCSATQNSFGKIRD 279
            :|:|...|...|..||.|:..|:.        :|::                         |::|
Zfish   186 KNEYASQLQKYNKEQNNYYYADIP--------FVYK-------------------------KLQD 217

  Fly   280 QAQQLTREYNLQCCYLFYPVLKQ-HIQYDFEACDNDPVRKVTAEHESAAETLTKEAKNLAGRVVK 343
            ..::..            |:|.. ::|:      :|..:|:........::           ::.
Zfish   218 LEERCV------------PMLADGYVQF------SDSEKKILPNINKCLDS-----------IIS 253

  Fly   344 ENASIRENAKKLALCQSLRDSGQRTDPNDPNGPDLDTKIEEFRDQIRRSETEK------------ 396
            ....|.|....|||.:..:....         |..|.:.|:|...::.:..|.            
Zfish   254 SGRRIDEKQDTLALIEQYKSGAV---------PPADVEFEDFSQAVKPAAAENTAHLPKVRIKQL 309

  Fly   397 -------TKAEACLQCLRDG---------GINVDEWVQEAENMGVQELTRSASSISMR--TDASG 443
                   |..:..:.|.::.         ...:.|.|:|.:....:||.:|.:.:.|:  .:.:.
Zfish   310 FLKKNKVTSPDKPMPCSQEDLSRLPPDQRRRRLQEKVEEVQKELQKELEQSEALMKMKGVYEQNS 374

  Fly   444 QGENPSSDSFYDSDKEETQAA---AQTK---PKQEQQLSRDRTFSDSEDEPEVRPSAAAASSAAA 502
            |..:|:|     ...:.||.|   |:.:   .||:.||:                .|...:....
Zfish   375 QLGDPAS-----LQPQITQTAHNIARLRGELKKQQVQLT----------------EAGGGTIKYY 418

  Fly   503 ASSS-----MMASSAGGWDDPT-EVNWGAGEEEDDKDEPIVPEPKEAIFKCTALYSYTAQNPDEL 561
            .|||     :..||....|:.. |.::   :|:.|.|.||.        :|.|||.:...:...:
Zfish   419 PSSSEYISVLSESSVSPTDEELYECDF---DEDFDSDMPIA--------QCRALYDFDGSSEGSV 472

  Fly   562 TIVENEQLEVVGEGDGDGWLRARNYRGEEGYVPHNYLDI 600
            ::...|||.|:.:..||||:|.:...|:.||||.:|:.|
Zfish   473 SMSVGEQLSVMDQDQGDGWVRVQKSTGDVGYVPASYIQI 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwkNP_001286994.1 BAR 16..281 CDD:353336 47/260 (18%)
SH3_FCHSD_1 545..600 CDD:212695 19/54 (35%)
SH3 663..718 CDD:354299
PRK12323 <725..956 CDD:237057
trip10bNP_956518.1 F-BAR_CIP4-like 7..255 CDD:153337 52/325 (16%)
HR1_CIP4_FNBP1L 334..414 CDD:212018 19/100 (19%)
SH3_CIP4-like 457..511 CDD:212844 19/53 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D348563at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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