DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nwk and fchsd2

DIOPT Version :9

Sequence 1:NP_001286994.1 Gene:nwk / 39052 FlyBaseID:FBgn0263456 Length:1075 Species:Drosophila melanogaster
Sequence 2:XP_031751437.1 Gene:fchsd2 / 100124657 XenbaseID:XB-GENE-5824265 Length:784 Species:Xenopus tropicalis


Alignment Length:872 Identity:278/872 - (31%)
Similarity:428/872 - (49%) Gaps:191/872 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQPPPRKGNYVKFLKNLHTEQVAKLQLKNQHECDLLEDIRQFTIKRSAVEKSYSESLLKISSQYL 65
            |||||||....:.|||:|:||:.|||.|:|.|||||||:|.|:.|::|||:.|::::.|::||||
 Frog    11 MQPPPRKVKVTQELKNIHSEQMTKLQAKHQAECDLLEDMRTFSQKKAAVEREYAQTIQKLASQYL 75

  Fly    66 NKKIPNI-PDIKMEGMEERWNMWSVWRTVLEENEKLARARLAAIEVFQQQIADEAKVLRDYKLAI 129
            .|:.|.: ||   |..|.| ::::||::.||...::.::::...|.::..|::.|:.::.||...
 Frog    76 KKEWPAVKPD---ERSEYR-SIYTVWKSFLEGTMQVTQSQINICENYKNLISEPARTVKLYKEQQ 136

  Fly   130 AKRSLAGIVNVQKELHLSVGDVDKTKKSYFDEEHCAHDVRDKARDIEEKLKKKKGSFFQSITSLQ 194
            .||.:..:..:|.||..:|.|:.|.||.|::.|..||.:|:|| ||:   .|.|.|.|||..|||
 Frog   137 LKRCVDQLTKIQAELQETVKDLAKAKKKYYEAEQMAHAMREKA-DID---AKSKLSLFQSRISLQ 197

  Fly   195 KNSARVTSRKELLEEKSSGARNDYVLSLAAANAHQNRYFTVDLQTTMTTMENYVFERVAEYLMLM 259
            |.:.::.:|:.....|::.|||||:|:||||||||:||:..||...|..::..|::.:.:|||.:
 Frog   198 KANVKLKARRSECNAKATHARNDYLLTLAAANAHQDRYYQTDLANAMKALDGNVYDHLKDYLMAL 262

  Fly   260 GRTELLTCSATQNSFGKIRDQAQQ----------LTREYNLQCCYLFYPVLKQHIQYDFEACDND 314
            .||||..|.|.||:|..:.:.:.:          :.|:||||.......|..:...:.|:.||:|
 Frog   263 SRTELEKCQAVQNTFQYLLETSSRAFMQLKFPSSVMRDYNLQLFVQENLVFHKAQPFQFQPCDSD 327

  Fly   315 --------------PV----------RKVTAEHESAAE-TLTKEAKNLAGRVVKENASIRENAKK 354
                          ||          |::.:|..:..| :|.|||:..|.||.:|:.:|..:.:.
 Frog   328 TSFSAVPLVDIEPSPVSAMRMILAKSRQLESETGTTEEHSLNKEARKWATRVAREHKNIIHSQRA 392

  Fly   355 LALCQSLRDSGQRTDPNDPNGPDLDTKIEEFRDQIRRSETEKTKAEACLQCLRDGGINVDEWVQE 419
            |...:.     |.|..::.:..:|:.||||.|:.:|::|..|.||||.|..||..|::||.|::.
 Frog   393 LEELEC-----QTTPVSEQSRMELEQKIEETRENMRKAEITKLKAEARLDLLRQIGVSVDTWLKS 452

  Fly   420 AENMGVQEL--TRSASSISMRTDASGQGENPSSDSFYDSDKEETQAAAQTKPKQEQQLSRDRTFS 482
            |.|..::||  .|.||..::..:.|      |.....|.|:|:         .:|.:.|.| .|.
 Frog   453 AMNQVMEELENERWASLPTLMNNGS------SHMGGTDVDRED---------GEELEDSMD-AFD 501

  Fly   483 DSEDEPEVRPSAAAASSAAAASSSMMASSAGGWDDPTEVNWGAGEEEDDKDEPIVPEPKEAIFKC 547
            ||...|               |.::                        ::.|:.         |
 Frog   502 DSSSSP---------------SGTL------------------------RNYPLT---------C 518

  Fly   548 TALYSYTAQNPDELTIVENEQLEVVGEGDGDGWLRARNYRGEEGYVPHNYLDIDQETAGSAFNGT 612
            ..:|||.|..||||||.|:|.|||:.:||.:.|::|||..|:.||||..||..           .
 Frog   519 KVIYSYKASQPDELTIEEHEMLEVIEDGDMEDWVKARNKSGQVGYVPEKYLQF-----------P 572

  Fly   613 SGNQLRSQISFSSVDYTVDNEDQTVDSMQSPDQVSVIMAPQKRVKSDVEWCI--ALYDYDATAED 675
            :.|.|.|.:...:   .:|:...|..:....|..|      ..:..|...|.  |||:||...:|
 Frog   573 ASNSLLSMLQSLA---ALDSRSHTSSNSNDADMAS------GSLNGDTNVCFVKALYEYDGQTDD 628

  Fly   676 ELTFEEGDKIKIITKTAHGVDDGWWEGELDGKFGNFPSLVVEECDEMGEPLSEGGDE-------- 732
            ||:|.||..|:|:.|.... |||:||||.:|:.|.|||::|||...     ||.||.        
 Frog   629 ELSFPEGAIIRILNKENQD-DDGFWEGEFNGRIGVFPSVLVEELTG-----SENGDAQWFGDVQI 687

  Fly   733 SPPPTAAPTFALPPAPAL--PPE---YAHELELELTEDMFGSQDTADEDSGYIPNGAAAPSIPPP 792
            ||.|  .|..:|||.|..  ||.   |:.:                ..::.|.|.   :||    
 Frog   688 SPSP--KPQNSLPPLPLYDQPPSSPLYSPD----------------KNNAQYFPR---SPS---- 727

  Fly   793 VLIQEPGMEDDLSDD----GQPPPSLP 815
                  |.|:::|.|    ..||.|:|
 Frog   728 ------GNENNMSLDSPGTSHPPRSMP 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwkNP_001286994.1 BAR 16..281 CDD:353336 107/265 (40%)
SH3_FCHSD_1 545..600 CDD:212695 29/54 (54%)
SH3 663..718 CDD:354299 28/56 (50%)
PRK12323 <725..956 CDD:237057 27/108 (25%)
fchsd2XP_031751437.1 F-BAR_FCHSD2 26..285 CDD:153361 107/266 (40%)
SH3_FCHSD_1 515..571 CDD:212695 30/64 (47%)
SH3_FCHSD2_2 615..670 CDD:212827 27/55 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 179 1.000 Domainoid score I3471
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8887
Inparanoid 1 1.050 362 1.000 Inparanoid score I2146
OMA 1 1.010 - - QHG52870
OrthoDB 1 1.010 - - D154524at33208
OrthoFinder 1 1.000 - - FOG0007087
OrthoInspector 1 1.000 - - otm47629
Panther 1 1.100 - - O PTHR15735
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2901
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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