DRSC/TRiP Functional Genomics Resources

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Protein Alignment Use1 and use1

DIOPT Version :9

Sequence 1:NP_648289.2 Gene:Use1 / 39051 FlyBaseID:FBgn0035965 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_956618.1 Gene:use1 / 393294 ZFINID:ZDB-GENE-040426-1015 Length:258 Species:Danio rerio


Alignment Length:267 Identity:80/267 - (29%)
Similarity:134/267 - (50%) Gaps:31/267 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAT-KLNVNIRTLLANCEELA--KSEQNFWRLQKFIKSLDTMLAELEAMGDPQSVKRIPGYLERL 62
            ||| :|.:|...||:.||.||  |..:..|||:|::.:|:.|...|:......:.:.:..|..::
Zfish     1 MATSRLEINFVRLLSRCESLASEKRAETEWRLEKYVGALEEMFVALKKSPSKPTPETLTDYNRKV 65

  Fly    63 QALKISTGYADVPGSTTKT-------PSQSSAVSETGENALKEIRQLQNSKYHNELRKELLQD-- 118
            ..||.......:|....|:       |.::..:|.....|.|.:.....::...|:||||:..  
Zfish    66 DFLKGLLEAEKLPSPAEKSLANQFLAPGRTPTISSERTPASKTVHIQSKARCAGEMRKELMSSGV 130

  Fly   119 ------SDALRRRRG--ADESSSSSGSANVQETSGENMNQAAKYYTNAQEKITEHMLSLTRNLKE 175
                  .:.||.|:.  .||..|::           .::|..:::.|.|||:.:.||:|.||||.
Zfish   131 SNSALLENDLRHRKSLPVDERQSAA-----------ELDQILQHHHNLQEKLADDMLNLARNLKN 184

  Fly   176 QTETANRIIRRDTEVVSRSAGMADRNINSLGKEAEKLEQHSKKAYKCWLWLMIAFVIATFIGMVL 240
            .|..|..||::|.:.:::|...||.|...|..|:|:||||:||:...:||||:..|..|||.|:|
Zfish   185 NTLAAQNIIKQDNQTLTQSMRQADVNFEKLKTESERLEQHAKKSVNWFLWLMLIVVSFTFISMIL 249

  Fly   241 FMKIMKK 247
            |:::..:
Zfish   250 FIRLFPR 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Use1NP_648289.2 Use1 5..245 CDD:286796 77/258 (30%)
use1NP_956618.1 Use1 6..254 CDD:286796 77/258 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583647
Domainoid 1 1.000 121 1.000 Domainoid score I5661
eggNOG 1 0.900 - - E1_KOG2678
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10214
Inparanoid 1 1.050 122 1.000 Inparanoid score I4723
OMA 1 1.010 - - QHG48592
OrthoDB 1 1.010 - - D1442410at2759
OrthoFinder 1 1.000 - - FOG0005428
OrthoInspector 1 1.000 - - oto40257
orthoMCL 1 0.900 - - OOG6_104533
Panther 1 1.100 - - LDO PTHR13050
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2891
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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