DRSC/TRiP Functional Genomics Resources

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Protein Alignment Use1 and Use1

DIOPT Version :10

Sequence 1:NP_648289.2 Gene:Use1 / 39051 FlyBaseID:FBgn0035965 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_315922.4 Gene:Use1 / 1276559 VectorBaseID:AGAMI1_006386 Length:238 Species:Anopheles gambiae


Alignment Length:250 Identity:111/250 - (44%)
Similarity:158/250 - (63%) Gaps:16/250 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATKLNVNIRTLLANCEELAKSEQNFWRLQKFIKSLDTMLAELEAMGDPQSVKRIPGYLERLQAL 65
            ||:||.:|||:|:|.|||:...::..|||:|:|:|||.|:.|||...|....|.:..|..|...|
Mosquito     1 MASKLEINIRSLIAQCEEIVAVDKQDWRLKKYIRSLDIMIQELEEQFDKPEDKVLEDYQNRCTEL 65

  Fly    66 KISTGYAD-VPGSTTKTPSQSSAVSETGENALKEIRQLQNSKYHNELRKELLQDS-DALRRRRGA 128
            |.::.|.: .|....:..::..|....|::.::|:||..:.||..|||.||...: ..:|||.| 
Mosquito    66 KQASSYVEPTPEEKRRLRTKPKATDPAGDDVMREVRQFHDQKYEKELRSELFNGNFSTIRRRAG- 129

  Fly   129 DESSSSSGSANVQETSGENMNQAAKYYTNAQEKITEHMLSLTRNLKEQTETANRIIRRDTEVVSR 193
                         :...||:.|..|.|:..||::.|.||.||||||||||||.:|:::|||:||:
Mosquito   130 -------------QKVAENLEQTVKQYSTEQERLAEDMLKLTRNLKEQTETAGKILKKDTEIVSK 181

  Fly   194 SAGMADRNINSLGKEAEKLEQHSKKAYKCWLWLMIAFVIATFIGMVLFMKIMKKK 248
            ||.:.|:|.:||..|:.||:::||||.|||:||||.|||.|||.||:|||||||:
Mosquito   182 SAKLTDQNTSSLTTESTKLQENSKKACKCWMWLMIVFVIITFIFMVMFMKIMKKR 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Use1NP_648289.2 Use1 4..245 CDD:462882 105/242 (43%)
Use1XP_315922.4 None

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