DRSC/TRiP Functional Genomics Resources

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Protein Alignment bol and GBP2

DIOPT Version :10

Sequence 1:NP_001261614.1 Gene:bol / 39049 FlyBaseID:FBgn0011206 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_009916.1 Gene:GBP2 / 850346 SGDID:S000000517 Length:427 Species:Saccharomyces cerevisiae


Alignment Length:113 Identity:33/113 - (29%)
Similarity:44/113 - (38%) Gaps:20/113 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GGG------------LETPLAAPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVD 67
            |||            ||....|.|..  ..|.|||..::.|.|..||..:|...|.|....||..
Yeast    94 GGGRGRTLGPIVERDLERQFDATKRN--FENSIFVRNLTFDCTPEDLKELFGTVGEVVEADIITS 156

  Fly    68 RAGVSKGYGFVTFETEQEAQRLQADGECVVLRDRKLNIAPAIKKQPNP 115
            : |..:|.|.|.|...:..|...:..:..:..||||.:     :|.||
Yeast   157 K-GHHRGMGTVEFTKNESVQDAISKFDGALFMDRKLMV-----RQDNP 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bolNP_001261614.1 RRM_DAZL_BOULE 31..111 CDD:409846 23/79 (29%)
PABP-1234 <45..219 CDD:130689 21/71 (30%)
GBP2NP_009916.1 RRM1_HRB1_GBP2 121..197 CDD:410184 24/81 (30%)
RRM2_HRB1_GBP2 218..292 CDD:410185
RRM3_HRB1_GBP2 347..425 CDD:410186
Blue background indicates that the domain is not in the aligned region.

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