DRSC/TRiP Functional Genomics Resources

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Protein Alignment bol and AT3G14100

DIOPT Version :10

Sequence 1:NP_001261614.1 Gene:bol / 39049 FlyBaseID:FBgn0011206 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_188026.1 Gene:AT3G14100 / 820626 AraportID:AT3G14100 Length:427 Species:Arabidopsis thaliana


Alignment Length:216 Identity:58/216 - (26%)
Similarity:90/216 - (41%) Gaps:39/216 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IFVGGISGDTTEADLTRVFSAYGTVKSTKIIVD-RAGVSKGYGFVTFETEQEAQRL--QADGECV 96
            ||||.:|.:.|:|.|.:.||.:.:....:::.| :.|.|:|:|||:|..:|:||..  :.:|:.:
plant   146 IFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWL 210

  Fly    97 VLRDRKLNIA-----PAIKKQPNPLQSIV-ATNGAV---YYTTTPPAPISNIPMDQFAAAVY--- 149
            ..|..:.|.|     ....|..:..:|:| .|.|:.   ..|.....|.:|   .|| ..||   
plant   211 SSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEETPENN---SQF-TTVYVGN 271

  Fly   150 --PPVTD------FTAAGVPAIYPPSAMQYQ--PFYQYYSVPMNVPTIWPQNYQENHSPLLH--- 201
              |.||.      |.|.|...|......:.:  .|.:|.:.|.....|...|.|    |.|.   
plant   272 LAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPEAALAIQMGNTQ----PYLFNRQ 332

  Fly   202 ---SPTSNPHSPHSQSHPQSP 219
               |..:.|..|.:.|:|..|
plant   333 IKCSWGNKPTPPGTASNPLPP 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bolNP_001261614.1 RRM_DAZL_BOULE 31..111 CDD:409846 25/83 (30%)
PABP-1234 <45..219 CDD:130689 52/204 (25%)
AT3G14100NP_188026.1 RRM1_PUB1 61..131 CDD:410026
RRM2_PUB1 143..222 CDD:410031 25/75 (33%)
RRM_SF 265..341 CDD:473069 18/79 (23%)
Blue background indicates that the domain is not in the aligned region.

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