DRSC/TRiP Functional Genomics Resources

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Protein Alignment bol and rbm24b

DIOPT Version :10

Sequence 1:NP_001261614.1 Gene:bol / 39049 FlyBaseID:FBgn0011206 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_001315070.1 Gene:rbm24b / 562236 ZFINID:ZDB-GENE-060312-43 Length:245 Species:Danio rerio


Alignment Length:193 Identity:52/193 - (26%)
Similarity:77/193 - (39%) Gaps:47/193 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDR-AGVSKGYGFVTFETEQEAQRLQADGECVV 97
            :|||||:...||::.|.:.|..:|.::...:|.|| .|.|:||||||.     |.|..|:..|  
Zfish    12 KIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTM-----ADRSAAERAC-- 69

  Fly    98 LRDRKLNIAPAIKKQPNPLQSIVATNGAVYYTTTPPAPISNIPMDQFAA-AVYP-----PVTDFT 156
                         |.|||:......|..:.|....|..:.  |...|.. .::|     |..|..
Zfish    70 -------------KDPNPIIDGRKANVNLAYLGAKPRILQ--PGFSFGVPQIHPTFLQRPYGDSE 119

  Fly   157 AAGVPAIYPPSAMQYQPFYQYYSVPMNVPTIWPQNYQENHSPLLHSPTSNPHSPHSQSHPQSP 219
            ....|.:|||      ||.|...:|.:.  ::||.:.:....:          ||.|:...||
Zfish   120 DDHSPLLYPP------PFRQVMRIPAHY--VYPQAFVQPSVVI----------PHVQASSSSP 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bolNP_001261614.1 RRM_DAZL_BOULE 31..111 CDD:409846 25/77 (32%)
PABP-1234 <45..219 CDD:130689 44/180 (24%)
rbm24bNP_001315070.1 RRM_RBM24_RBM38_like 11..86 CDD:409818 30/93 (32%)
PABP-1234 <23..>158 CDD:130689 43/174 (25%)

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