DRSC/TRiP Functional Genomics Resources

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Protein Alignment bol and MSI1

DIOPT Version :10

Sequence 1:NP_001261614.1 Gene:bol / 39049 FlyBaseID:FBgn0011206 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_002433.1 Gene:MSI1 / 4440 HGNCID:7330 Length:362 Species:Homo sapiens


Alignment Length:175 Identity:43/175 - (24%)
Similarity:75/175 - (42%) Gaps:20/175 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 AAPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDR-AGVSKGYGFVTFETEQEA 86
            |.||..|. ..:|||||:|.:||..|:.:.|..:|.|....::.|: ....:|:||||||:|...
Human   100 AQPKMVTR-TKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIV 163

  Fly    87 QRLQADGECVVLRDRKLNIAPAIKKQPNPLQSIVATNGAVYYTTTPPAPISNIPMDQFAAAV--- 148
            :::     |.: ...::|......|:..|.:.:..|..|...:...|     ..||.|...:   
Human   164 EKV-----CEI-HFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMP-----YGMDAFMLGIGML 217

  Fly   149 -YP--PVTDFTAAGVPAIYPPSAMQYQPFYQYYSVPMNVPTIWPQ 190
             ||  ..|.:.:.....:.|....|: |.::....|:....:.|:
Human   218 GYPGFQATTYASRSYTGLAPGYTYQF-PEFRVERTPLPSAPVLPE 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bolNP_001261614.1 RRM_DAZL_BOULE 31..111 CDD:409846 23/80 (29%)
PABP-1234 <45..219 CDD:130689 32/153 (21%)
MSI1NP_002433.1 RRM1_MSI 21..96 CDD:409990
PABP-1234 <32..339 CDD:130689 43/175 (25%)
RRM2_MSI 110..183 CDD:240769 23/78 (29%)
Blue background indicates that the domain is not in the aligned region.

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