DRSC/TRiP Functional Genomics Resources

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Protein Alignment bol and rbm24

DIOPT Version :10

Sequence 1:NP_001261614.1 Gene:bol / 39049 FlyBaseID:FBgn0011206 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_989016.1 Gene:rbm24 / 394612 XenbaseID:XB-GENE-493647 Length:226 Species:Xenopus tropicalis


Alignment Length:200 Identity:53/200 - (26%)
Similarity:80/200 - (40%) Gaps:53/200 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDR-AGVSKGYGFVTFETEQEAQRLQADGECVV 97
            :|||||:...||::.|.:.|..:|.::...:|.|| .|.|:||||||......|:|...|.. .:
 Frog    12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PI 75

  Fly    98 LRDRKLN-----------------------IAPAIKKQPNPLQSIVATNGAVY-YTTTPPAPISN 138
            :..||.|                       |.||:.::|..:.:     ..|| :....|..:  
 Frog    76 IDGRKANVNLAYLGAKPRIMQPGFAFGVQQIHPALIQRPFGIPA-----HYVYPHAFVQPGVV-- 133

  Fly   139 IP-MDQFAAAVYPPVTDFTAAGVPAIYPPSAMQYQPFYQY------------------YSVPMNV 184
            || :.|.|||...|..|:|:|.. |.|..:|.....:.||                  |:||..:
 Frog   134 IPHVQQAAAASTSPYIDYTSAAY-AQYSAAAAAAAAYDQYPYAASPATTGYVTTAGYGYAVPQPL 197

  Fly   185 PTIWP 189
            ....|
 Frog   198 TAAAP 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bolNP_001261614.1 RRM_DAZL_BOULE 31..111 CDD:409846 30/100 (30%)
PABP-1234 <45..219 CDD:130689 46/188 (24%)
rbm24NP_989016.1 RRM_RBM24_RBM38_like 11..86 CDD:409818 27/74 (36%)

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