Protein Alignment bol and Msi2

DIOPT Version :10

• Sequence 1: NP_001261614.1
• Gene: bol / 39049
• FlyBaseID: FBgn0011206
• Length: 233
• Species: Drosophila melanogaster
• Sequence 2: NP_001417161.1
• Gene: Msi2 / 360596
• RGDID: 1560397
• Length: 354
• Species: Rattus norvegicus
• Alignment Length: 227
• Identity: 59/227 - (25%)
• Similarity: 88/227 - (38%)
• Gaps: 46/227 - (20%)

  Fly    23 AAPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDR-AGVSKGYGFVTFETEQEA 86
            |.||..|. ..:|||||:|.:|...|:.:.|..:|.|:...::.|: ....:|:||||||.|...
  Rat   101 AQPKMVTR-TKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVV 164

  Fly    87 QRL---------QADGECVVLRDRKLNIAPAIKKQPNPL----------------QSIVATNGAV 126
            :::         ....||...:.:::...|..:.:...|                .:.|||.|..
  Rat   165 EKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRG 229

  Fly   127 YYTTTP------PA--PISNIPMDQFAAAVYPPVTDFTAAGVPAIYPPSAMQY--QPFYQYYSVP 181
            |....|      ||  |..|.   .|.||.|.||   .||.|.|........|  ||.:...:.|
  Rat   230 YPGFAPSYGYQFPALLPYLNA---SFPAAAYGPV---AAAAVAAARGSVLNSYSAQPNFGAPTSP 288

  Fly   182 MNVPTIWPQNYQENHSPLLHSPTSNPHSPHSQ 213
            .......|..:...:||   .|.::.:.|.||
  Rat   289 AGSNPARPGGFPGANSP---GPVADLYGPASQ 317

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bol	NP_001261614.1	RRM_DAZL_BOULE	31..111	CDD:409846	23/89 (26%)
		PABP-1234	<45..219	CDD:130689	48/205 (23%)
Msi2	NP_001417161.1	None