DRSC/TRiP Functional Genomics Resources

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Protein Alignment bol and Rbm34

DIOPT Version :10

Sequence 1:NP_001261614.1 Gene:bol / 39049 FlyBaseID:FBgn0011206 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_001014037.1 Gene:Rbm34 / 307956 RGDID:1310161 Length:428 Species:Rattus norvegicus


Alignment Length:79 Identity:22/79 - (27%)
Similarity:39/79 - (49%) Gaps:2/79 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IFVGGISGDTTEADLTRVFSAYGTVKSTKIIVD-RAGVSKGYGFVTFETEQEAQRLQADGECVVL 98
            :|||.:.....|:.|...|...|::.:.:|:.: ..||.:|:|:|.|| ..:|..|........|
  Rat   287 VFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFE-NTDAVHLALKLNNSEL 350

  Fly    99 RDRKLNIAPAIKKQ 112
            ..|||.:..::.|:
  Rat   351 MGRKLRVMRSVNKE 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bolNP_001261614.1 RRM_DAZL_BOULE 31..111 CDD:409846 21/76 (28%)
PABP-1234 <45..219 CDD:130689 19/69 (28%)
Rbm34NP_001014037.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..106
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..152
RRM1_RBM34 183..274 CDD:409828
RRM2_RBM34 286..358 CDD:409829 21/71 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 361..428 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.

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