DRSC/TRiP Functional Genomics Resources

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Protein Alignment bol and slrp-1

DIOPT Version :10

Sequence 1:NP_001261614.1 Gene:bol / 39049 FlyBaseID:FBgn0011206 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_506360.1 Gene:slrp-1 / 179840 WormBaseID:WBGene00008224 Length:114 Species:Caenorhabditis elegans


Alignment Length:76 Identity:17/76 - (22%)
Similarity:39/76 - (51%) Gaps:2/76 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IFVGGISGDTTEADLTRVFSAYGTVKSTKIIVD-RAGVSKGYGFVTFETEQEAQRLQADGECVVL 98
            :::..:...|.::.|...|..||:::|..:..| ..|:.:|:..:||:::..|.:.......|:.
 Worm    27 VYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVID 91

  Fly    99 RDRKLNIAPAI 109
            .|| :::.|.|
 Worm    92 GDR-VDVEPYI 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bolNP_001261614.1 RRM_DAZL_BOULE 31..111 CDD:409846 17/76 (22%)
PABP-1234 <45..219 CDD:130689 16/66 (24%)
slrp-1NP_506360.1 RRM_SF 26..97 CDD:473069 15/70 (21%)

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