DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment teq and ndl

DIOPT Version :9

Sequence 1:NP_648288.2 Gene:teq / 39048 FlyBaseID:FBgn0023479 Length:2792 Species:Drosophila melanogaster
Sequence 2:NP_523947.2 Gene:ndl / 38738 FlyBaseID:FBgn0002926 Length:2616 Species:Drosophila melanogaster


Alignment Length:1478 Identity:288/1478 - (19%)
Similarity:492/1478 - (33%) Gaps:454/1478 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1490 KYLRCGPGQAEMYDCPSQ--QIFSVSRRVCVLDDKLSSYDRTDYLVRGVNSGWMDPSNDNRQSKS 1552
            :::||.....:  ||.|.  :::.:::.|....:|:.:..|.           ..|..::...:|
  Fly   169 EFVRCKKHTPQ--DCMSAFLRMYKMAKEVTEKMEKMKAIMRE-----------QQPKLESSSMES 220

  Fly  1553 YETSGRDQFGN--RYTTRTTTTTRVIGDRWTDMNMQRPSGVG--VEQNPHHHHHGYNPGWSGQET 1613
            :|..|.....:  :.||...||..|...........:||.:.  ::.:.|.....|..|...:||
  Fly   221 HEQKGTFSPADLIQVTTAEATTVAVHATEKPARTKIKPSRISWIIDGHDHDESPVYTDGAPKKET 285

  Fly  1614 SYVQRGPTQSTLYVEGSLQPNRNYPTNKTPLAPMAPTNTGGV-----YYGQPVEDKQNVPS-RQN 1672
            :   :.|..:|..||.:........|.:|.:    .:.|..:     ::.:|.|..:.... .|.
  Fly   286 T---KAPWNTTQLVEITTTKIDATATERTTV----ESTTEKISWILDHFDKPQEILRTTEGPGQR 343

  Fly  1673 YSRRIDYGSPGNGWKPMPPLDPLGGQQPLNLDYSPHSPG-------AKEPQSQDSLPGQKPINLD 1730
            ..|.:...|..:        :|:...:..|.|:.|.:..       ...|........|:.::.|
  Fly   344 IIRNVTTTSASS--------EPIVDTENTNSDHVPTTENGLVFNITTDGPVETTKSTAQRKLSFD 400

  Fly  1731 Y----DEEPIPQYLHNGLPPYPGSP----------------PRFYPDQLPSGSKPIGRQQPVESS 1775
            :    :|...|:...........:.                |:...|.:..|.:.:   :|.|::
  Fly   401 WILDGEENVEPEVKSTNTTTTTAATTTTGATSETIIVTTELPKITFDWIIDGREVV---EPQETT 462

  Fly  1776 PDASGYPDQQKPLDPDNGLHGSKVPPRHSPNPGYPLYNESNLYGGLLPPKPDSPVNTTPTPTPNP 1840
            .:.:|..::.:.:..|..:.|.:|                        .:|...|.||...|   
  Fly   463 TEVTGTTERLRKMPFDWIIDGEEV------------------------VEPQENVTTTTIAT--- 500

  Fly  1841 SSSQAPTPQLANRLHTFPIYP----PV-----------DNKTSLRNPIQPHYSPSYAGIAHSRDA 1890
             :....|.::..|:|....||    ||           ..:.|..:..||..:        :|:|
  Fly   501 -TVAVSTTEINERIHNSTAYPTKPKPVKFDWIIDGGESSGEVSTSSTSQPKLT--------TREA 556

  Fly  1891 PWAKVPVTSTTPAQDPDPFNPELDEPFYDDVDFLTTTVRNVLVPPPFDHKFYSPQSTNP---SIN 1952
                     .:..:.|...:| ||.|         |::.|:|      ..|...:...|   .:|
  Fly   557 ---------ISNPESPRSSHP-LDNP---------TSIENML------ESFEQHEEQKPILRVLN 596

  Fly  1953 RNQSASGPNSQAAIKEALKLMLRPYFNHSGNAQEQLAQQAESAI-VSVISKPSTTTTTTPRPTSK 2016
            .|:|:|...:....::   |.|:.:.:.:...|.:|.....:|: ...:.|..            
  Fly   597 ANESSSETVTDGYERQ---LWLKKFEDQARPNQNELIDTFGTALDAKALDKMG------------ 646

  Fly  2017 TPKTDP-------DFDAELIKAGEQESLDSVDDDYVFPDARETSRTEQ-TLDPSTTYASTNFQRS 2073
             ||.:|       ..||:::...|:.:|...:......|.....:.|. |..||..:.|    |:
  Fly   647 -PKINPLNGHTWNAADAQILSLCERVALRMRNKVATMSDGETKEKGETFTASPSVQFTS----RA 706

  Fly  2074 TRRAELDPDTLTATT---MKTNWHAPGHSRDYHRRHPNLPDPFTEHHPNSSPHQHHHHHRHPHEH 2135
            .....:..:|:.|:.   ...|:..|.....::....|...|...:.|.....|..|.....:..
  Fly   707 PGGFPVSGETMKASAQFMFNPNFGMPSIPVCFYMTPANFRMPMWSNTPTFMGMQGAHFGGSSNPG 771

  Fly  2136 SADFHIRHPELPNPFPLKNETPQHQDLNDDWDLLPNSNAEEVTPKLATRSSFNTQCDFDCGNGQC 2200
            :..|.:               ||                           .|....:|..|:|  
  Fly   772 AGIFFV---------------PQ---------------------------QFGPSGNFFGGSG-- 792

  Fly  2201 LKKEEICDGKKNCPNGKDEANCPPSDYEVRLSGGESPNM----GRIEVKANGQWGYVCDDKFGLK 2261
                           |..             :||:..|:    ...:...|||            
  Fly   793 ---------------GSG-------------AGGQGANIFSKNASPQKPTNGQ------------ 817

  Fly  2262 DADVVCRELGFQMG----------AQEVRGSSFYAPPNQDFNYLMDEVECHGNET----KLGQCA 2312
             ..|.|..:..|.|          .|:..|.|.::    :.|:.|.    |.|:|    :.||..
  Fly   818 -QQVYCSYMQNQSGQGAGQSQTSSQQQQGGQSAFS----NANFKMR----HANQTNTANQQGQII 873

  Fly  2313 FKGWGVHNCGVDEVAGVTCKVPVM---KCPN-NYWLCHTSKECIPPAFVCDNTPDCADKSDECAA 2373
            :..:          ||:. :.|:.   :||. :.:.|...:||||.|..|||..||:|.|||.|.
  Fly   874 YASY----------AGLP-QQPIQERSRCPEPDQFSCFGQQECIPAARWCDNVVDCSDGSDESAC 927

  Fly  2374 VCQAPVQYRLEGGRNSNEGRLEVKHHGVWGSVCDDDFNLKSAQVACNSMGFFGPAKIEKNIFGN- 2437
            .|...|          :|.||           ||   ..:...:..:.:|.||...:..:.:.| 
  Fly   928 TCADRV----------DEERL-----------CD---GYEDCPMGEDELGCFGCESLAYSCYENP 968

  Fly  2438 ------SNGPIWLDQVMCFG------------NETSIDQC--------NHWNWGE--------HN 2468
                  :...|    .||:.            |....:||        :|.:.|.        ||
  Fly   969 QDFAKRNRSTI----SMCYSRLERCDGFMNCLNGRDEEQCSMLVTDVADHMSHGASASEGYLYHN 1029

  Fly  2469 --------CNHTED-VALHCSAGPPPRSQRYSQTQIKGGRSLGRETTPKTYSQIGLWE--RSSKA 2522
                    ||:.|. .||.|......|....:...:    |....|.|..:.:..|..  ..::|
  Fly  1030 YRGDWHPVCNNGEKWAALACQMDENSRMDHSASLNV----SFQTLTLPGPFIEPSLHAGVHFAQA 1090

  Fly  2523 VH-----------------TPRRCGIFKDDLTDEYAHR-------------EERVVRGNVAQRGR 2557
            .|                 .|.:||:.......|::.|             :.|:|.|:.....:
  Fly  1091 CHGRNSHDSLVDHVAYVKCPPMQCGLPSKSSMLEHSKRVRRAVSDSKEIVGDGRIVGGSYTSALQ 1155

  Fly  2558 HPWQATIRTRGRGGISSHWCGAVVISKRHLLTAAHCLYGSPKGAYFVRVG----DHYANIAESSE 2618
            .|:...|...|:     ..||..:.|.|.:::||||:....|..|.||.|    ..|:...:...
  Fly  1156 WPFVVAIYRNGK-----FHCGGTIYSDRWIISAAHCVINYGKYFYEVRAGLLRRSSYSPATQIQP 1215

  Fly  2619 VDSFIENWYLHENFRKGTHMNNDIALVVLKTPLKFSDYVQPICLPDKNAEL---------VEDRK 2674
            |...:    :|:.:.:.: |.||::|:.|..||:|:.:|:|||||||....         ||...
  Fly  1216 VSHVV----VHQAYERRS-MRNDLSLLRLLNPLQFNRWVKPICLPDKGRTTVGDDWIWGPVEHTL 1275

  Fly  2675 CTISGWGSI--KSGVSTP-AQVLGSAELPILADHVCKQSNVYGSAMSEGMFCAGSMDESVDACEG 2736
            ||:.|||:|  |...|.| .||:    :||.     |:........||.: |||..|...|||:|
  Fly  1276 CTVVGWGAIREKGPSSDPMRQVI----VPIR-----KKCTDPEDQASEDI-CAGDPDGGRDACQG 1330

  Fly  2737 DSGGPLVC---SDDDGETLYGLISWGQHCGFKNRPGVYVRVNHYIDWI 2781
            ||||||.|   |:.|...|.|::|.|..|......|||.||..|:||:
  Fly  1331 DSGGPLFCRSVSNPDEFYLAGVVSHGNGCARPQEFGVYTRVTLYLDWL 1378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
teqNP_648288.2 CBM_14 65..115 CDD:279884
ChtBD2 136..184 CDD:214696
ChtBD2 215..261 CDD:214696
ChtBD2 284..327 CDD:214696
CBM_14 521..569 CDD:279884
ChtBD2 608..654 CDD:214696
ChtBD2 709..752 CDD:214696
CBM_14 782..830 CDD:279884
ChtBD2 864..909 CDD:214696
CBM_14 942..993 CDD:279884
RCR <1051..1126 CDD:304939
RCR <1116..1210 CDD:304939
ChtBD2 1324..1369 CDD:214696
ChtBD2 1474..1518 CDD:214696 6/29 (21%)
LDLa 2193..2222 CDD:238060 4/28 (14%)
SR 2229..2331 CDD:214555 22/119 (18%)
SRCR 2234..2332 CDD:278931 21/115 (18%)
LDLa 2337..2370 CDD:197566 15/33 (45%)
SR 2382..2480 CDD:214555 24/141 (17%)
SRCR 2386..2480 CDD:278931 24/137 (18%)
Tryp_SPc 2546..2781 CDD:214473 85/253 (34%)
Tryp_SPc 2547..2784 CDD:238113 85/254 (33%)
ndlNP_523947.2 LDLa 891..927 CDD:238060 17/35 (49%)
Tryp_SPc 1144..1377 CDD:214473 84/252 (33%)
Tryp_SPc 1145..1379 CDD:238113 85/254 (33%)
LDLa 1399..1430 CDD:238060
Metaviral_G 1448..1600 CDD:118131
LDLa 1710..1743 CDD:238060
LDLa 1776..1811 CDD:238060
DUF1986 2041..2158 CDD:286432
LDLa 2309..2339 CDD:197566
LDLa 2350..2383 CDD:197566
LDLa 2421..2457 CDD:238060
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24258
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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