DRSC/TRiP Functional Genomics Resources

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Protein Alignment teq and Ssc4d

DIOPT Version :10

Sequence 1:NP_648288.2 Gene:teq / 39048 FlyBaseID:FBgn0023479 Length:2792 Species:Drosophila melanogaster
Sequence 2:NP_001418649.1 Gene:Ssc4d / 304401 RGDID:1306970 Length:586 Species:Rattus norvegicus


Alignment Length:412 Identity:135/412 - (32%)
Similarity:175/412 - (42%) Gaps:102/412 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  2163 NDDWDLLPNSNAEEVTPKLATRSSF------------------NTQCD------FDCGN-----G 2198
            :||||::   :|..|..:|....:.                  |.:|.      .:||:     .
  Rat    95 DDDWDVV---DANVVCRQLGCGLALPVPRPLTFGQGRGPIFLDNVECRGQEASLSECGSRGWGVH 156

  Fly  2199 QCLKKEEI---CD--------GKK---------NCPNGKDEANCPPSDYEVRLSGGESPNMGRIE 2243
            .|...|::   ||        .:|         ...||:.|.:       |||:||.||..||:|
  Rat   157 NCFHYEDVAVLCDEFLHTQPPARKVLTSIAPPTALQNGRGEGS-------VRLAGGASPCQGRVE 214

  Fly  2244 VKANGQWGYVCDDKFGLKDADVVCRELGFQMGAQEVRGSSFYAPPNQDFNY-----LMDEVECHG 2303
            :...|.||.||||.:||.||.||||:||.        |::..|..|..|.|     |:|.|.|.|
  Rat   215 ILHGGLWGTVCDDDWGLPDAAVVCRQLGC--------GAALAATTNAFFGYGTGHILLDNVHCEG 271

  Fly  2304 NETKLGQCAFKGWGVHNCGVDEVAGVTCKVPVMKCPNNY----------WLCHTSKECIPPAFVC 2358
            .|.:|..|...||||||||..|.|||.|  .|:..|.:.          |..||.    |.|...
  Rat   272 GEPRLAACQSLGWGVHNCGHHEDAGVLC--AVLSPPTSTALPPSVTKEDWAWHTE----PAATGV 330

  Fly  2359 DNTP--DCADKSDECAAVCQAPVQYRLEGGRNSNEGRLEVKHHGVWGSVCDDDFNLKSAQVACNS 2421
            ...|  |....:....|..:...:.||.||.:...||:||.:.|.||:|||||::...|:|||..
  Rat   331 GALPSRDTIRFTTAAWASGKKSGRLRLVGGPSPCRGRVEVLYAGGWGTVCDDDWDFADARVACRE 395

  Fly  2422 MGFFGPAKIEKNI--FGNSNGPIWLDQVMCFGNETSIDQCNHWNWGEHNCNHTEDVALHCSAGPP 2484
            .| .|||.....:  ||...||:.||.|.|.|.|..:..|.|..||:|||.|.||....| |||.
  Rat   396 AG-CGPALGATGLGHFGYGRGPVLLDNVGCTGTEARLSDCFHLGWGQHNCGHHEDAGALC-AGPE 458

  Fly  2485 PRSQRYSQTQIKGGRSLGRETT 2506
            ....:..|.        |.|||
  Rat   459 ELGLQVQQD--------GSETT 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
teqNP_648288.2 CBM_14 65..115 CDD:426342
ChtBD2 136..184 CDD:214696
ChtBD2 215..261 CDD:214696
ChtBD2 284..327 CDD:214696
ChtBD2 521..567 CDD:214696
ChtBD2 608..654 CDD:214696
ChtBD2 709..752 CDD:214696
CBM_14 782..829 CDD:426342
ChtBD2 864..909 CDD:214696
CBM_14 942..993 CDD:426342
Med15 1029..>1325 CDD:312941
ChtBD2 1324..1369 CDD:214696
ChtBD2 1474..1518 CDD:214696
PHA03247 <1587..1906 CDD:223021
LDLa 2193..2222 CDD:238060 10/53 (19%)
SR 2229..2331 CDD:214555 52/106 (49%)
LDLa 2337..2370 CDD:197566 8/44 (18%)
SR 2382..2480 CDD:214555 44/99 (44%)
Tryp_SPc 2547..2784 CDD:238113
Ssc4dNP_001418649.1 SR 69..168 CDD:214555 13/75 (17%)
SR 200..299 CDD:214555 52/106 (49%)
SR 355..454 CDD:214555 44/99 (44%)
SR 484..584 CDD:214555
Blue background indicates that the domain is not in the aligned region.

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