DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment teq and Ssc5d

DIOPT Version :9

Sequence 1:NP_648288.2 Gene:teq / 39048 FlyBaseID:FBgn0023479 Length:2792 Species:Drosophila melanogaster
Sequence 2:NP_766596.1 Gene:Ssc5d / 269855 MGIID:3606211 Length:1371 Species:Mus musculus


Alignment Length:891 Identity:216/891 - (24%)
Similarity:313/891 - (35%) Gaps:244/891 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  2025 DAELIKAGE------QESLDSVDDDYVFPDARETSRTEQTLDPSTTYA---STNFQRSTRRAELD 2080
            ||.::..|:      ::|:..:|.|.....:.|.|.:.:  :|..|:|   :.:.|...|:....
Mouse   114 DAGVVCVGQRAANSREDSMSLLDGDPWLALSGELSPSSE--EPPITHAPQPAASSQNGPRKKNPR 176

  Fly  2081 PDTLTATTMKTNWHAPGHSRDYHRRHPNLPDPFTEHHPNSSPHQHH-HHHRHPHEHSADFHIRHP 2144
            |...|.:|                |.|.|        .|.:|||.. .....||..:....:.|.
Mouse   177 PPKQTKST----------------RAPVL--------TNGAPHQERLRLVSGPHGCAGRLEVWHG 217

  Fly  2145 ELPNPFPLKNETPQHQDLNDDWDLLPNSNAEEVTPKLATRSSFNT--------------QCDFDC 2195
            ......           .:|.|||   .:|.....:|....:...              ..|..|
Mouse   218 GRWGTV-----------CDDGWDL---RDAAVACRELGCGGALAAPGGARFGPGEGPVWMDDVGC 268

  Fly  2196 GNGQCLKKEEICD------GKKNCPNGKDEA-NCPPSDYEVRLSGGESPNMGRIEVKANGQWGYV 2253
            |.|:    |.:.|      |:.||.:.:|.. .|......:||:.|.....||:||...|:||.|
Mouse   269 GGGE----EALRDCPRSPWGRSNCDHTEDAGLVCTGPAPRIRLADGPHGCAGRLEVWHGGRWGSV 329

  Fly  2254 CDDKFGLKDADVVCRELGFQMGAQEVRGSSFYAPPNQDFNYLMDEVECHGNETKLGQCAFKGWGV 2318
            |||.:.|:||.|.|:|||.. ||....|.:|:.......  ::|::.|.||||.|..|..:.||.
Mouse   330 CDDAWDLRDAAVACKELGCG-GALAAPGGAFFGEGTGPI--ILDDLRCRGNETALRFCPARPWGQ 391

  Fly  2319 HNCGVDEVAGVTC----------KVPVMKCPNN-YWLCHTSKECIP------PAFVCDNTPDCAD 2366
            |:|...|.||..|          .||.:...:. :.|..||...:|      |.......|    
Mouse   392 HDCHHREDAGAVCDGMPLGAVQPTVPAVDSNSTAHRLLSTSVGQMPGPAGPWPPSASPTAP---- 452

  Fly  2367 KSDECAAVCQAPVQYRLEGGRNSNEGRLEVKHHGVWGSVCDDDFNLKSAQVACNSMGFFGPAKIE 2431
              .|......:| |.||..|.:...|||||.|.|.||:||||.::::.:.|.|..:|...|.:.:
Mouse   453 --PEPGPEAGSP-QLRLVAGPSRCSGRLEVWHDGRWGTVCDDSWDMRDSAVVCRELGCGRPRQPD 514

  Fly  2432 --KNIFGNSNGPIWLDQVMCFGNETSIDQCNHWNWGEHNCNHTEDVALHCSAGP--PPRSQRYSQ 2492
              ...||...||||||.|.|.|.|.|:.:|...:||:|||.|.|||.:.|:..|  ...|..:|.
Mouse   515 PAAGRFGWGAGPIWLDDVGCMGTEASLSECPAASWGKHNCAHNEDVGVTCTGTPGLDTISDPFSW 579

  Fly  2493 TQIKGGRSLGR--------ETTPKTYSQI------------GLWERSSK---------------- 2521
            :.:.|   |||        |.|.|..:.:            |...:|:|                
Mouse   580 SWLPG---LGRDQDAWLPGELTTKPSASLTSSVPQKPTKVPGKAPKSTKKWVTKNARRPTTQPPG 641

  Fly  2522 --------------AVHTPRRCGIFKDDLTDEYAHREERVVRGNVAQRGRHPWQATIR------T 2566
                          ::|...|.......||.|..||:  .....|....|.||:.|..      |
Mouse   642 MPTTKHSRAPGTPTSLHPTARTSELPKRLTTEAPHRQ--TSHTTVRLTPRVPWEWTSEPVVSQST 704

  Fly  2567 RGRGGISSHWCGAVVISKRHLLTAAHCLYGS-----------------PKGAYFVRVGDHYANIA 2614
            :|...::|. .......:..|..:.....||                 |.|.:.||:.|.....|
Mouse   705 QGPQEVTSE-ATTTENPQTSLEPSGENTEGSLESSQDPATTPTAGVPVPSGPFRVRLADGPNRCA 768

  Fly  2615 ESSEVDSFIENWYLHENFRKGTHMNNDIALVVLKTPLKFSDYVQPICLPDKNAELVEDRKCTISG 2679
            ...||      |  |... .||                       :|  |.:.::   |..|::.
Mouse   769 GRLEV------W--HAGL-WGT-----------------------VC--DDSWDI---RDATVAC 796

  Fly  2680 W----GSIKSGVSTPAQVLGSAELPI-LADHVCKQSNVYGSAMSEGMFCAGSMDESVD---ACEG 2736
            |    |.::..|.......|:.  || |.|..||.|.:..|....|.:...:.|...|   .|.|
Mouse   797 WELGCGKVRPRVGKTHYGPGTG--PIWLDDMGCKGSEMSLSDCPSGAWGKHNCDHEEDVVLTCTG 859

  Fly  2737 DSGGPLVCSDDDGETLYGLISWGQHCGFKNRPG--VYVRVNHYIDW 2780
            .:|      |||    |...:|....|.....|  |..|..|.:.|
Mouse   860 YTG------DDD----YPSWTWDPTSGEDLTKGTTVAARPGHTLSW 895

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
teqNP_648288.2 CBM_14 65..115 CDD:279884
ChtBD2 136..184 CDD:214696
ChtBD2 215..261 CDD:214696
ChtBD2 284..327 CDD:214696
CBM_14 521..569 CDD:279884
ChtBD2 608..654 CDD:214696
ChtBD2 709..752 CDD:214696
CBM_14 782..830 CDD:279884
ChtBD2 864..909 CDD:214696
CBM_14 942..993 CDD:279884
RCR <1051..1126 CDD:304939
RCR <1116..1210 CDD:304939
ChtBD2 1324..1369 CDD:214696
ChtBD2 1474..1518 CDD:214696
LDLa 2193..2222 CDD:238060 9/35 (26%)
SR 2229..2331 CDD:214555 41/101 (41%)
SRCR 2234..2332 CDD:278931 40/107 (37%)
LDLa 2337..2370 CDD:197566 6/39 (15%)
SR 2382..2480 CDD:214555 43/99 (43%)
SRCR 2386..2480 CDD:278931 41/95 (43%)
Tryp_SPc 2546..2781 CDD:214473 56/268 (21%)
Tryp_SPc 2547..2784 CDD:238113 56/267 (21%)
Ssc5dNP_766596.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 592..756 26/166 (16%)
DamX 594..>757 CDD:225805 26/165 (16%)
SR 758..858 CDD:214555 29/138 (21%)
SRCR 763..858 CDD:278931 26/133 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 888..1270 3/8 (38%)
DUF2722 <1011..>1187 CDD:287780
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1351..1371
SR 20..119 CDD:214555 2/4 (50%)
SRCR 25..119 CDD:278931 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..200 17/82 (21%)
SR 199..299 CDD:214555 19/117 (16%)
SRCR 204..299 CDD:278931 19/112 (17%)
SR 305..404 CDD:214555 41/101 (41%)
SRCR 310..404 CDD:278931 39/96 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 431..466 8/41 (20%)
SR 464..565 CDD:214555 43/100 (43%)
SRCR 469..565 CDD:278931 41/95 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 96 1.000 Domainoid score I7291
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D158600at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.