DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment teq and R02F2.4

DIOPT Version :10

Sequence 1:NP_648288.2 Gene:teq / 39048 FlyBaseID:FBgn0023479 Length:2792 Species:Drosophila melanogaster
Sequence 2:NP_498171.1 Gene:R02F2.4 / 175755 WormBaseID:WBGene00019833 Length:431 Species:Caenorhabditis elegans


Alignment Length:490 Identity:99/490 - (20%)
Similarity:166/490 - (33%) Gaps:160/490 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 TSSSSFTSAEIQVNYLLCPVGAVGQFVHPFDQTKFLSCKDGKSAVQNCQPNYVFSISRRYCQLK- 330
            |.:|.|.:....|...:.|:||.        :.:||:|..|::...:|..:.|:..:..:|..: 
 Worm    16 TVNSKFVTDCTNVGDGMYPLGAC--------EPRFLACVSGEARYMDCPEDLVYHKNLEFCDWRH 72

  Fly   331 -------------------------AQLAFTDYVTLIISEISYEYSLILNACPGNINGIFLYPYD 370
                                     .::.|.|     .|..|....|:.|.|....:|::.....
 Worm    73 NVFECGEEGEENEFSGDGSGESSGDEEITFGD-----SSGESSGDELLENVCESLKDGVYSSGTC 132

  Fly   371 AKKYVQCSSGGRMSILSCGPQMAFSVSQRSCLPSHQVHISDRVQFWQEV-----QVQTTYTSQDL 430
            :..|:.|:||. ...|||...:.:..:.:.|             .|:.:     ||...|...| 
 Worm   133 SSSYIICNSGS-PRFLSCSTPLIYDPTNKKC-------------SWKGMIDECSQVSGEYCESD- 182

  Fly   431 RGNV-QSQLSSL-----------RSCPPNVQKN-------YP-----------YPFHAGH----- 460
             ||: :|:.|::           |:||.|:..|       :|           .|.:.|.     
 Worm   183 -GNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEKSEKPQNCGEVDGYF 246

  Fly   461 --------YVRCQYGALEIICCPTGQLYSLSQRQCVPRSLLSAHDYLDYSYISAELSTE------ 511
                    :..|..|...::.||.|.::|...:.|            ||.:...|...|      
 Worm   247 SFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMC------------DYEWNVDECDLESSGFME 299

  Fly   512 -FMVDRSTLSCPPQAQGLYLHPFDCT-KYVRCWNQQTFIESCTPGEIFSFSNQKC-VPKEQCKGP 573
             :....:...|.....|||  ..||| :.:.|.|.:..|..|.|..:|:.::..| .|:...|..
 Worm   300 NYKASEALTPCTNMDNGLY--ALDCTPRVLSCQNGRENIFECPPSLVFNENSLICDYPETSLKCC 362

  Fly   574 TDHVEYLIETTTVTTYDS--DGPESASSLAKTGDISCPPGASGNHAHPFDCTKFLECSNGQTFVK 636
            .:.. .||...::.|||.  ||..|::..::                     .:.:|||||....
 Worm   363 MEDA-LLIRDASIGTYDCSIDGLFSSTLCSR---------------------NYHKCSNGQLIPH 405

  Fly   637 NCGPGTA-FSTAKHICDHANQVDCSGRNSLPEQSQ 670
            .|....| ||.:...|     ||    :||.||.|
 Worm   406 ECADSNAVFSASAAKC-----VD----SSLLEQCQ 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
teqNP_648288.2 CBM_14 65..115 CDD:426342
ChtBD2 136..184 CDD:214696
ChtBD2 215..261 CDD:214696
ChtBD2 284..327 CDD:214696 9/42 (21%)
ChtBD2 521..567 CDD:214696 14/47 (30%)
ChtBD2 608..654 CDD:214696 10/46 (22%)
ChtBD2 709..752 CDD:214696
CBM_14 782..829 CDD:426342
ChtBD2 864..909 CDD:214696
CBM_14 942..993 CDD:426342
Med15 1029..>1325 CDD:312941
ChtBD2 1324..1369 CDD:214696
ChtBD2 1474..1518 CDD:214696
PHA03247 <1587..1906 CDD:223021
LDLa 2193..2222 CDD:238060
SR 2229..2331 CDD:214555
LDLa 2337..2370 CDD:197566
SR 2382..2480 CDD:214555
Tryp_SPc 2547..2784 CDD:238113
R02F2.4NP_498171.1 CBM_14 25..74 CDD:426342 11/56 (20%)
ChtBD2 117..165 CDD:214696 11/61 (18%)
CBM_14 185..229 CDD:426342 8/43 (19%)
ChtBD2 240..283 CDD:214696 8/54 (15%)
CBM_14 310..361 CDD:426342 15/52 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.