DRSC/TRiP Functional Genomics Resources

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Protein Alignment teq and loxl2

DIOPT Version :10

Sequence 1:NP_648288.2 Gene:teq / 39048 FlyBaseID:FBgn0023479 Length:2792 Species:Drosophila melanogaster
Sequence 2:NP_001135520.1 Gene:loxl2 / 100216062 XenbaseID:XB-GENE-1010775 Length:767 Species:Xenopus tropicalis


Alignment Length:400 Identity:110/400 - (27%)
Similarity:147/400 - (36%) Gaps:131/400 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  2221 NCPPSDYEVRLSGGE-SPNMGRIEVKANGQWGYVCDDKFGLKDADVVCRELGFQMGAQEVRGSSF 2284
            |.|  ...|||:|.: ..|.||:||...|:||.||||.|.:..|.:||||||:| .|.....||.
 Frog    45 NVP--QIHVRLAGEKRKHNEGRVEVYYEGEWGTVCDDDFSMYAAHIVCRELGYQ-DAVSWSPSSK 106

  Fly  2285 YAPPNQDFNYLMDEVECHGNETKLGQCAFKGWGVHNCGVDEVAGVTC---KVPVMKCPNNY---- 2342
            |.  ..:....:|.|.|:|.|..:..|...||||.:|...|..||.|   ::|..|..|..    
 Frog   107 YG--KGEGRIWLDNVNCNGREKSIASCGSNGWGVTDCKHSEDVGVQCSDRRIPGFKVSNELPGQL 169

  Fly  2343 -------------------------------------W--LCHTSKECIPPAFVC---------- 2358
                                                 |  :|:..........||          
 Frog   170 EGLNIQVEEVRIRAILSAYRKRVPVTEGFVEVKVQGSWRQVCNAEWSSKNSRVVCGMFGFPAEKK 234

  Fly  2359 -DN-------------------------------------TPD------CADKSD---ECA---- 2372
             :|                                     |||      |:|.|.   .|.    
 Frog   235 FNNKVYKLFSSRRKHTYWQFSANCTGNEAHLSSCKVGGVLTPDPKTNQTCSDGSPAVVSCTPGRA 299

  Fly  2373 -----------AVCQAPVQYRLEGGRNSNEGRLEVKHHGVWGSVCDDDFNLKSAQVACNSMGFFG 2426
                       |..|.....||.||.|:.|||:||..:|.||::|||.:||.:|.|.|..:| ||
 Frog   300 FAPSPGTGFRKAFRQEQPLVRLRGGANTGEGRVEVLKNGEWGTICDDKWNLVTASVVCRELG-FG 363

  Fly  2427 PAK--IEKNIFGNSNGPIWLDQVMCFGNETSIDQCNHWNWGEHNCNHTEDVALHCSAGPPPRSQR 2489
            .||  :.....|...|.|.:.::.|.|.|.|:..|. :|.....|||.||.|:.|:.   |....
 Frog   364 SAKEALAGAQMGQGMGHIHMSEIQCNGFEKSLIDCK-FNVHSQGCNHEEDAAVRCNV---PAMGF 424

  Fly  2490 YSQTQIKGGR 2499
            .:|.::.|||
 Frog   425 ENQVRLSGGR 434

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
teqNP_648288.2 CBM_14 65..115 CDD:426342
ChtBD2 136..184 CDD:214696
ChtBD2 215..261 CDD:214696
ChtBD2 284..327 CDD:214696
ChtBD2 521..567 CDD:214696
ChtBD2 608..654 CDD:214696
ChtBD2 709..752 CDD:214696
CBM_14 782..829 CDD:426342
ChtBD2 864..909 CDD:214696
CBM_14 942..993 CDD:426342
Med15 1029..>1325 CDD:312941
ChtBD2 1324..1369 CDD:214696
ChtBD2 1474..1518 CDD:214696
PHA03247 <1587..1906 CDD:223021