Protein Alignment CG4942 and Cox18

DIOPT Version :10

• Sequence 1: NP_648286.1
• Gene: CG4942 / 39044
• FlyBaseID: FBgn0035960
• Length: 351
• Species: Drosophila melanogaster
• Sequence 2: NP_001156928.1
• Gene: Cox18 / 231430
• MGIID: 2448532
• Length: 332
• Species: Mus musculus
• Alignment Length: 285
• Identity: 122/285 - (42%)
• Similarity: 183/285 - (64%)
• Gaps: 8/285 - (2%)

  Fly    43 AAASVQLANAGGLVGYWQTLSNSTPVAYMQDVLIKIHDYSGLPWWASIVLSTFLFRSVVTLPLTI 107
            |||||..|:.|   |:::.|:.|.||...::||:...:.:|||||::|:|||...|..|||||..
Mouse    39 AAASVSAASPG---GWYEALAASAPVRTAEEVLLGAQEATGLPWWSNIILSTVALRGAVTLPLAA 100

  Fly   108 YQHKITARIEKIALEMPAIVEELKKEAAMAKHKFKWSEKQTQIVYRRSIKKQWQNLIVRDNCHPM 172
            |||.|.|::|.:..|:..|.:.|.:|.|:...:|.||::..::.|.:::::....|.|||||||.
Mouse   101 YQHYILAKVENLQPEIKDIAKRLNQEVAVCARQFGWSKRVARLTYLKNMRRLISELYVRDNCHPF 165

  Fly   173 KTMIVLWGQIPLWIFQSVALRNLVYMLPDPTSIQAQI-VTTEMTIGGFGWIPNLTVVDNSYILPV 236
            |..:::|.|:|:|:|.|||||||   ....|...|.| |..::..||..|.|:||.||:::||||
Mouse   166 KATVLVWVQLPMWVFISVALRNL---STGATHSDAGISVQEQLAAGGTLWFPDLTAVDSTWILPV 227

  Fly   237 ALGLINLAIIEVQAMSRTRPSTRLQNIANNVFRGLSVVMVPVACTVPSALCVYWVASSSFGLAQN 301
            ::|::||.|:|:.|:.:...| |.|....|..|.:||:|:|||.||||||.:||:.||..|||||
Mouse   228 SVGVVNLLIVEIFALQKIGTS-RFQMYVTNFVRAVSVLMIPVAATVPSALVLYWLCSSLMGLAQN 291

  Fly   302 LLILSPEVRRSVGIPKTQTELSEPY 326
            ||:.||..|:...||.::::...||
Mouse   292 LLLRSPGFRQLCRIPPSKSDSETPY 316

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4942	NP_648286.1	5TM_Oxa1-like	83..307	CDD:410993	101/224 (45%)
Cox18	NP_001156928.1	5TM_Oxa1-like	76..297	CDD:410993	101/224 (45%)