DRSC/TRiP Functional Genomics Resources

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Protein Alignment OR4Q2 and Olr669

DIOPT Version :9

Sequence 1:NP_001335200.1 Gene:OR4Q2 / 390432 HGNCID:15359 Length:313 Species:Homo sapiens
Sequence 2:NP_001000349.1 Gene:Olr669 / 295876 RGDID:1334218 Length:311 Species:Rattus norvegicus


Alignment Length:302 Identity:157/302 - (51%)
Similarity:211/302 - (69%) Gaps:3/302 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     4 NQTEVMREFFLSGFSQTPSIEAGLFVLFLFFYMSIWVGNVLIMVTVASDKYLNSSPMYFLLGNLS 68
            ||:.| .||.|.|.||.|.|:...||:||..|::..|||::|:||:|....|..|||||.|..||
  Rat     3 NQSFV-NEFILLGLSQNPQIKKISFVIFLLVYIATLVGNMMIVVTIAYSPALLGSPMYFFLAVLS 66

Human    69 FLDLCYSTVTTPKLLADFFNHEKLISYDQCIVQLFFLHFVGAAEMFLLTVMAYDRYVAICRPLHY 133
            |||.|.|:|.|||::.|.....|.||::.|:.|:|.:||:.|.|:.:|..||||||||||:||||
  Rat    67 FLDACVSSVVTPKMIVDMVYERKSISFECCMTQVFAVHFLTAVEVIVLAAMAYDRYVAICKPLHY 131

Human   134 TTVMSQGLCCVLVAASWMGGFVHSTVQTILTVHLPFCGPNQVENFFCDVPPVIKLACADTFVIEL 198
            :::|::.||..||..:|.|||:||.:|...|:.|||||||.:::|.||:.|::||||.||.:..:
  Rat   132 SSIMNRRLCGTLVGVAWAGGFLHSIIQIAFTLPLPFCGPNVIDHFICDLFPLLKLACTDTHIFII 196

Human   199 LMVSNSGLISTISFVVLISSYTTILVKIR--SKEGRRKALSTCASHLMVVTLFFGPCIFIYARPF 261
            |:.:|||.|..|.|..|:.||..||..:|  |.||||||||||.||:.||..||.|||.|||||.
  Rat   197 LVFANSGSICIIIFSFLLISYGVILFALRAHSSEGRRKALSTCGSHITVVVFFFVPCILIYARPT 261

Human   262 STFSVDKMVSVLYNVITPMLNPLIYTLRNKEVKSAMQKLWVR 303
            |.||.:|.|.|..:|:||:|||::||.||||:.:|::|:|.|
  Rat   262 SAFSFEKNVFVFTDVLTPLLNPMVYTFRNKEMINAIRKMWKR 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OR4Q2NP_001335200.1 7tmA_OR4Q2-like 25..290 CDD:320604 138/266 (52%)
TM helix 1 26..52 CDD:320604 12/25 (48%)
TM helix 2 60..86 CDD:320604 15/25 (60%)
TM helix 3 98..128 CDD:320604 16/29 (55%)
TM helix 4 141..162 CDD:320604 11/20 (55%)
TM helix 5 196..226 CDD:320604 12/29 (41%)
TM helix 6 230..260 CDD:320604 22/29 (76%)
TM helix 7 265..290 CDD:320604 12/24 (50%)
Olr669NP_001000349.1 7tm_4 29..300 CDD:304433 141/270 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
HGNC 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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