DRSC/TRiP Functional Genomics Resources

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Protein Alignment OR4Q2 and or21.49

DIOPT Version :9

Sequence 1:NP_001335200.1 Gene:OR4Q2 / 390432 HGNCID:15359 Length:313 Species:Homo sapiens
Sequence 2:XP_017208556.1 Gene:or21.49 / 100151039 ZFINID:ZDB-GENE-091113-55 Length:313 Species:Danio rerio


Alignment Length:316 Identity:105/316 - (33%)
Similarity:173/316 - (54%) Gaps:22/316 - (6%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDKNQTEVMREFFLSGFSQTPSIEAGLFVLFLFFYMSIWVGNVLIMVTVASDKYLNSSPMYFLLG 65
            || |.|.......:.|...||.....:|::||..|:...|.|:.::..::::|.|: .||:||..
Zfish     1 MD-NLTFTNSILLVEGLKVTPQSSQSVFIMFLLAYIFAMVSNIGLIFLISTEKNLH-DPMHFLFC 63

Human    66 NLSFLDLCYSTVTTPKLLADFFNH--EKLISYDQCIVQLFFLHFVGAAEMFLLTVMAYDRYVAIC 128
            ||...|:..:||..|:||.|....  |:.|||.:|.:|.:|:|...|...::|.:||:|||||||
Zfish    64 NLPLNDIMGTTVIMPRLLQDILTEPSERYISYAECAIQAYFVHIFAAGCHYVLMIMAFDRYVAIC 128

Human   129 RPLHYTTVMSQGLCCVLVAASWMGGFVHSTVQTILTVHLPFCGPNQVENFFCDVPPVIKLACADT 193
            :||.||.:|:..:...|.|.:|...|:..|:...|::.|..| ..::||.|||...:.||:|   
Zfish   129 KPLRYTAIMTNKMVIALSALAWGLAFLFVTIMVGLSLRLSRC-RYKIENPFCDNASLFKLSC--- 189

Human   194 FVIELLMVSN-SGLI--------STISFVVLISSYTTILVKIRSKEGRRKALSTCASHLMV-VTL 248
               |.:.|:| .||:        |.:|..|......|:.:..::|....||:.||::||.| :.:
Zfish   190 ---ENVSVNNVFGLVYTVVALSLSALSIFVTYVKIATVCITSKNKALNSKAIKTCSTHLAVYLIM 251

Human   249 FFGPCIFIYARPFSTFSVD-KMVSVLYNVITPMLNPLIYTLRNKEVKSAMQKLWVR 303
            |....:||:...|..:|.: |:.|::::::.|.||||:|.|:.||::..:.|||.|
Zfish   252 FLTGAVFIFLHRFPEYSDNRKLASIMFHIVPPGLNPLVYGLQTKEIREKVVKLWCR 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OR4Q2NP_001335200.1 7tmA_OR4Q2-like 25..290 CDD:320604 92/277 (33%)
TM helix 1 26..52 CDD:320604 6/25 (24%)
TM helix 2 60..86 CDD:320604 11/25 (44%)
TM helix 3 98..128 CDD:320604 13/29 (45%)
TM helix 4 141..162 CDD:320604 5/20 (25%)
TM helix 5 196..226 CDD:320604 9/38 (24%)
TM helix 6 230..260 CDD:320604 10/30 (33%)
TM helix 7 265..290 CDD:320604 10/25 (40%)
or21.49XP_017208556.1 7tm_4 30..308 CDD:304433 97/286 (34%)
7tm_1 41..290 CDD:278431 85/256 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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