DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4911 and Fbxl20

DIOPT Version :9

Sequence 1:NP_001286990.1 Gene:CG4911 / 39043 FlyBaseID:FBgn0035959 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_006534361.1 Gene:Fbxl20 / 72194 MGIID:1919444 Length:438 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4911NP_001286990.1 F-box 8..53 CDD:279040
Fbxl20XP_006534361.1 F-box-like 30..71 CDD:403981
leucine-rich repeat 67..94 CDD:275381
AMN1 95..291 CDD:187754
leucine-rich repeat 95..114 CDD:275381
leucine-rich repeat 121..146 CDD:275381
leucine-rich repeat 147..172 CDD:275381
leucine-rich repeat 173..198 CDD:275381
leucine-rich repeat 199..224 CDD:275381
AMN1 222..396 CDD:187754
leucine-rich repeat 225..250 CDD:275381
leucine-rich repeat 251..276 CDD:275381
leucine-rich repeat 277..302 CDD:275381
leucine-rich repeat 303..328 CDD:275381
leucine-rich repeat 329..357 CDD:275381
leucine-rich repeat 358..382 CDD:275381
leucine-rich repeat 383..408 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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