DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4911 and Fbxo39

DIOPT Version :9

Sequence 1:NP_001286990.1 Gene:CG4911 / 39043 FlyBaseID:FBgn0035959 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_006533964.2 Gene:Fbxo39 / 628100 MGIID:3505735 Length:480 Species:Mus musculus


Alignment Length:454 Identity:103/454 - (22%)
Similarity:181/454 - (39%) Gaps:92/454 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QRQPEWHRIPSVALNHIFDYLNPQDRRSAAGVCFSWRHALFQKRYFRNFRFQLDVGCDDQ----- 64
            |.|..|..:|.|.|..:|.:|..:||..||.||..|...::....:| :|.....|...:     
Mouse    48 QEQSCWATLPDVCLRRVFWWLGDRDRSRAALVCRKWNQIMYSADLWR-YRTITFSGRPSRVHASE 111

  Fly    65 -------LAFFHRSMANLAMELIVVFDFQNAVHIQK----MRGLLYKVAHCDNIQKLRFQTHNVG 118
                   :..|.|.:.:|.::.:..:   |||..:|    |||||..:...:|  :||       
Mouse   112 FESALWYIKKFGRYLEHLEIKFLNPY---NAVLTKKFQVTMRGLLSCLGKSNN--RLR------- 164

  Fly   119 LVAIGNMHSEHLL---AIEQCFVEPLILFLSRKRQPCQLLDLGAIEALSYYGHDFLKAMGKPQEL 180
            .::|.::..:.|:   :|....::.|..||.:..:....|.|.........|...|.::...|..
Mouse   165 SLSIQHLELDRLVWRNSIRGSLIKSLSFFLKKMGKHLDHLSLKGARLTVEQGCHILNSLSYMQNE 229

  Fly   181 LQLTLASIKYDPSHYPILSLDSTLLQKCAA----LQVLSLDYDTLSDELLHTI---QVLPLRKLL 238
            ...:..:|:...||: :....|:...|..|    |..|:|:|:.:|||||.|:   ....||.:.
Mouse   230 NMASELNIEDFFSHH-LAVYGSSQFNKAMATFRNLTFLTLNYNCISDELLETLSENNAGTLRTMN 293

  Fly   239 IAVHGLDSEEHPDVS-ETAWSNFSDHFSSIEL--VLTLVYAYEAIALLQHRVLRSNMPVTHVRLL 300
            |..|..|  .|..|. ..:|:..:...|::::  ....|..||.:|    |:|...:||..:.|.
Mouse   294 IKCHVHD--PHGQVVWGMSWAKLARQASNLKVNFFFERVMKYERLA----RILLQEIPVRSISLR 352

  Fly   301 FCEKMNAEALDWMSLH---------YRETLRSIHYVDAPYKYSNRMNSSRRVSLLQDPFVMMAWR 356
            .|...:.   || |:.         :|.||:.:     .::::|...|      |.:...::...
Mouse   353 SCYFSDP---DW-SMRPTLTDLLPTFRNTLQKL-----TFEFNNNHES------LDEQLHLLILA 402

  Fly   357 CKQLEEIVVHGYLMDPHNLVGIARLRGRQ------LKRLEVSMIDWSGAPLLNAY--NEEISTL 412
            |::|....:..:|    ::..:.|:...|      |..|:|.:       ..|.|  |||..||
Mouse   403 CRKLFYFKIWAFL----DVKFVERILKSQEEGQCSLHTLKVRI-------YTNRYETNEEDRTL 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4911NP_001286990.1 F-box 8..53 CDD:279040 14/44 (32%)
Fbxo39XP_006533964.2 F-box-like 53..94 CDD:372399 13/40 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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