DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4911 and Fbxo33

DIOPT Version :9

Sequence 1:NP_001286990.1 Gene:CG4911 / 39043 FlyBaseID:FBgn0035959 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_006240181.1 Gene:Fbxo33 / 314157 RGDID:1307543 Length:563 Species:Rattus norvegicus


Alignment Length:507 Identity:120/507 - (23%)
Similarity:198/507 - (39%) Gaps:143/507 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IPSVALNHIFDYLNPQDRRSAAGVCFSWRHALFQKRYFRNFRFQLDVGCDDQ--LAFFHRSMANL 75
            :||..:.|||.:|...||..|:..|..||..||....:...|..|.|...:|  |.|..|.....
  Rat    74 LPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICLRVSPAEQPRLEFLMRKCGWF 138

  Fly    76 AMELIVVFDFQN----------------------------------------AVHIQKMRGLLYK 100
            ..||.|.|..:|                                        .::::.:..:|..
  Rat   139 VRELRVEFAAENYLSGGGGPGDGGGSGGGTDTGNGGEESEALQLSSRWLEVLRIYLELVLCVLLS 203

  Fly   101 VAHCDNIQKLRFQTHNVGLVAI----GNMHSEHL----------LAIEQCFVEPLILFLSRKRQP 151
            :.:..|:||...    .|.:::    |::.|.:|          ..|:|.|.|    .||..|| 
  Rat   204 IRNNRNLQKFSL----FGDISVVQQQGSLSSTYLSRVDPDGKKIKQIQQLFEE----ILSNSRQ- 259

  Fly   152 CQLLDLGAIEALSYYGHDFLKAMGKPQELLQLTLASIKYDPSHYPILSL----DSTL-----LQK 207
                       |.:....|:..:..|..|..|: .||.....|..:|..    :|||     |::
  Rat   260 -----------LKWLSCGFMLEIVTPSSLSSLS-NSIANTMEHLSLLDNNIPGNSTLITAVELER 312

  Fly   208 CAALQVLSLDYDTLSDELLHTI---QVLPLRKLLIAVH----------GLDSEEHPDVSETAWSN 259
            ...|:.|:||:...:.|:...:   ..:||::|.:.||          .:.::||       |..
  Rat   313 FVNLRSLALDFCDFTAEMARVLTDSNHVPLQRLSLLVHNASVMLKSLDNMPNDEH-------WKA 370

  Fly   260 FSDHFSSIELVLTLVYAYEAIALLQHRVLRSNMPVTHVRL---LFCEKMNAEALDWMSLHYRETL 321
            .|...||:.:.|   .|::..:....::|:.::|:..|..   :.|  ::...:|.:|..|.:.|
  Rat   371 LSRKSSSLRVYL---MAFDVKSEDMLKILKPSIPLERVHFDSYVTC--VSGAIVDLISRQYDKFL 430

  Fly   322 RSIHYV---------DAPYKYSNRMNSSRRVSLLQDPFVMMAWRCKQLEEIVVHGYLMDPHNLVG 377
              .|::         ..|....||.         :||.|::||||.:|..:.:|||.:..|||:.
  Rat   431 --THFILMNDMIDTSGFPDLSDNRN---------EDPLVLLAWRCTKLTLLAIHGYTVWAHNLIA 484

  Fly   378 IARLRGRQLKRLEVS--MIDWSGAPLLN-----AYN--EEISTLLGQQWSPI 420
            ||||||..||.|||:  .||:....|.:     .:|  |::|..|||.|..:
  Rat   485 IARLRGSDLKVLEVTEESIDFDQGELADQDVDPVHNLLEQVSLGLGQSWHAV 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4911NP_001286990.1 F-box 8..53 CDD:279040 14/39 (36%)
Fbxo33XP_006240181.1 F-box-like 72..119 CDD:289689 15/44 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341792
Domainoid 1 1.000 71 1.000 Domainoid score I9265
eggNOG 1 0.900 - - E1_2CMAU
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 88 1.000 Inparanoid score I5049
OMA 1 1.010 - - QHG47170
OrthoDB 1 1.010 - - D215358at33208
OrthoFinder 1 1.000 - - FOG0007383
OrthoInspector 1 1.000 - - oto97262
orthoMCL 1 0.900 - - OOG6_108362
Panther 1 1.100 - - LDO PTHR20933
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5507
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.810

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