DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and eomesb

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001077044.1 Gene:eomesb / 799447 ZFINID:ZDB-GENE-070318-1 Length:534 Species:Danio rerio


Alignment Length:347 Identity:129/347 - (37%)
Similarity:176/347 - (50%) Gaps:48/347 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LPGVEAKLE----NNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGD 116
            ||....:.:    |..||.:||:..|||||||.||||||.:..:::||...|.|.|.:|:|....
Zfish   132 LPSAALRAQVYLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNMTGLSLSAHYNVFVEIVLADP 196

  Fly   117 CRYKFSGSQWVPAGGAE-PQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNN---TLDSSGHIV 177
            ..::|.|.:||..|.|: .....::|:||:||.|||||..|.:.|.|:|||||   .:::|..||
Zfish   197 NHWRFQGGKWVTCGKADNNMQGNKIYMHPESPNTGAHWMRQEISFGKLKLTNNKGANINTSQMIV 261

  Fly   178 LASMHKYQPRLHIIRSSELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRES 242
            |.|:|||||||||:..|:......:..|.|.|||.:|:|||||||..||:||||:||||||||: 
Zfish   262 LQSLHKYQPRLHIVEVSDDRSERDSNTQIFSFPENQFIAVTAYQNTDITQLKIDHNPFAKGFRD- 325

  Fly   243 GQSRCKRKLNSSGNSTLESEDDGSSVSSCDSPQAKRQ-------RQDFEQDSTGSVSPAYYGATH 300
                     |.....|| .:.:..:.|..|||:|::.       .|.|.|:...|::........
Zfish   326 ---------NYDSMYTL-PDRERLTPSPADSPRAQQMVPNARYAVQPFLQEQFSSLTQRSVTQPS 380

  Fly   301 PVANPMSPYLRHHLSYGPSGAAGLPPSIAAAYFGGVPPQILP-----MPPATYAPTVAPVSPVAS 360
            .|.:|...:|   :|...|...      ..||.|.....:||     :|..:|.|..| .|....
Zfish   381 SVEDPAQRWL---ISQNSSKLE------LTAYEGEYSSSLLPYSFKSLPLQSYYPDTA-FSWGTR 435

  Fly   361 QPVGSSTPTT-------SPRPS 375
            ...|||.|..       |||||
Zfish   436 VSAGSSFPRKLPSGLPWSPRPS 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 91/194 (47%)
eomesbNP_001077044.1 TBOX 139..329 CDD:238106 92/199 (46%)
T-box_assoc 351..532 CDD:292794 28/117 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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