DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc1 and TBX6

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_004599.2 Gene:TBX6 / 6911 HGNCID:11605 Length:436 Species:Homo sapiens


Alignment Length:386 Identity:158/386 - (40%)
Similarity:220/386 - (56%) Gaps:69/386 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PFPSMLPFNMPHQQPHMMLPSRP----TLPGVEAKLENNDLWQQFHKIGTEMIITKSGRRMFPSM 92
            |.| :||..|..:.    .||.|    :||||...|||.:||::|..:||||||||:||||||:.
Human    65 PLP-LLPPAMGTEP----APSAPEALHSLPGVSLSLENRELWKEFSSVGTEMIITKAGRRMFPAC 124

  Fly    93 RVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQA 157
            |||::||:.||.|..||:::|:...||::.|.:|.|:|.|||:.|.|:|:|||||||||||..|.
Human   125 RVSVTGLDPEARYLFLLDVIPVDGARYRWQGRRWEPSGKAEPRLPDRVYIHPDSPATGAHWMRQP 189

  Fly   158 LLFNKVKLTNNTLDSSGHIVLASMHKYQPRLHIIRSSELTQLPWAPQQAFVFPETEFVAVTAYQN 222
            :.|::|||||:|||..||::|.||||||||:|::|:::|....|....:|.||||.|::||||||
Human   190 VSFHRVKLTNSTLDPHGHLILHSMHKYQPRIHLVRAAQLCSQHWGGMASFRFPETTFISVTAYQN 254

  Fly   223 DRITKLKIDNNPFAKGFRESGQ-------SRCKRKLNSSGNSTLESEDDGSSVSS-CDSPQAKRQ 279
            .:||:|||..|||||||||:|:       :|.||||.....:..|:...|.:... |||......
Human   255 PQITQLKIAANPFAKGFRENGRNCKRERDARVKRKLRGPEPAATEAYGSGDTPGGPCDSTLGGDI 319

  Fly   280 RQ-DFEQ-----DSTGSVSP---------------AYYGA-TH-PVANP----------MSPYLR 311
            |: |.||     ::|.:.:|               |::|| :| |..:|          .:||..
Human   320 RESDPEQAPAPGEATAAPAPLCGGPSAEAYLLHPAAFHGAPSHLPTRSPSFPEAPDSGRSAPYSA 384

  Fly   312 HHLSY----GPSGAAGLPPSI--AAAYFGGVPPQILPMP---PATYAPTVAPVSPVASQPV 363
            ..|..    |.||....||::  |..:..|.|   .|:|   |..|.       .|.|:|:
Human   385 AFLELPHGSGGSGYPAAPPAVPFAPHFLQGGP---FPLPYTAPGGYL-------DVGSKPM 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 108/193 (56%)
TBX6NP_004599.2 TBOX 90..277 CDD:238106 108/186 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..339 19/67 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 360..379 3/18 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141508
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 259 1.000 Inparanoid score I3129
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003805
OrthoInspector 1 1.000 - - otm41676
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4271
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
98.850

Return to query results.
Submit another query.