DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc1 and TBX5

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:XP_016875401.1 Gene:TBX5 / 6910 HGNCID:11604 Length:534 Species:Homo sapiens


Alignment Length:386 Identity:139/386 - (36%)
Similarity:199/386 - (51%) Gaps:76/386 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PSRPT-------LPGVEAKLENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVL 108
            ||.|.       :.|::..|...:||.:||::||||||||:|||||||.:|.::||..:..|.:|
Human    55 PSSPQAAFTQQGMEGIKVFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKVTGLNPKTKYILL 119

  Fly   109 LEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSS 173
            :::||..|.||||:.::|...|.|||..|.|:|:|||||||||||..|.:.|.|:|||||.||..
Human   120 MDIVPADDHRYKFADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPF 184

  Fly   174 GHIVLASMHKYQPRLHIIRSSELTQLPWAPQQAF---VFPETEFVAVTAYQNDRITKLKIDNNPF 235
            |||:|.|||||||||||:::.|.... .:...||   |||||.|:|||:|||.:||:|||:||||
Human   185 GHIILNSMHKYQPRLHIVKADENNGF-GSKNTAFCTHVFPETAFIAVTSYQNHKITQLKIENNPF 248

  Fly   236 AKGFRESG-------------------QSRCKRKLNSSGNSTLESEDDGSSVSS-------CDS- 273
            |||||.|.                   :|..::|: :|.:|...||....|.||       |:: 
Human   249 AKGFRGSDDMELHRMSRMQSKEYPVVPRSTVRQKV-ASNHSPFSSESRALSTSSNLGSQYQCENG 312

  Fly   274 -----------------PQ--------AKRQRQDFE----------QDSTGSVSPAYYGATHPVA 303
                             ||        .||:.::..          .:::.|...::|.:::|..
Human   313 VSGPSQDLLPPPNPYPLPQEHSQIYHCTKRKEEECSTTDHPYKKPYMETSPSEEDSFYRSSYPQQ 377

  Fly   304 NPMSPYLRHHLSYGPS--GAAGLPPSIAAAYFGGVPPQILPMPPATYAPTVAPVSPVASQP 362
            ..:....|...:...:  .|:..|||........:.....|..|:..:.||..|.|:...|
Human   378 QGLGASYRTESAQRQACMYASSAPPSEPVPSLEDISCNTWPSMPSYSSCTVTTVQPMDRLP 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 107/208 (51%)
TBX5XP_016875401.1 TBOX 69..257 CDD:238106 107/188 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.