DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc1 and TBX1

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:XP_016884414.1 Gene:TBX1 / 6899 HGNCID:11592 Length:545 Species:Homo sapiens


Alignment Length:401 Identity:151/401 - (37%)
Similarity:202/401 - (50%) Gaps:80/401 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PDPFPSMLPFNMPHQQPHMMLPSRPTLP-------------------GVEAKLENNDLWQQFHKI 75
            |.|.|...|| .|.........:.|..|                   ||..:||...||.:|:::
Human   113 PPPPPHAYPF-APAAGAATSAAAEPEGPGASCAAAAKAPVKKNAKVAGVSVQLEMKALWDEFNQL 176

  Fly    76 GTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYK--FSGSQWVPAGGAEPQSPQ 138
            |||||:||:||||||:.:|.|.|::..|.|.:|::.||:.|.||:  |..|.|:.||.|:|.:|.
Human   177 GTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLVAGKADPATPG 241

  Fly   139 RMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKYQPRLHII-----RSSELTQ 198
            |::.||||||.||.|..|.:.|:|:|||||.||.:|||:|.|||:||||.|::     :.||   
Human   242 RVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVYVDPRKDSE--- 303

  Fly   199 LPWAPQ--QAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESGQSRCKRKLNSSGNSTLES 261
             .:|.:  :.|||.||.|.|||||||.|||:|||.:||||||||:.......|. :..|...|.|
Human   304 -KYAEENFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDCDPEDWPRN-HRPGALPLMS 366

  Fly   262 --EDDGSSVSSCDSP-----QAKRQRQDFEQDSTGSVSPAYYG-ATHP---VANPMSPYLRHHLS 315
              ....:.|:|...|     .|...|::|::|:.|   ||..| ..||   :|..:||.|.    
Human   367 AFARSRNPVASPTQPSGTEKDAAEARREFQRDAGG---PAVLGDPAHPPQLLARVLSPSLP---- 424

  Fly   316 YGPSGAAGLPPSIAAAYFGGVPPQILPMPPATYAPTVAPVSPVASQPV----------------- 363
             |..||.||.|...|.  ||     .|.||   .|.:...:|.||:|:                 
Human   425 -GAGGAGGLVPLPGAP--GG-----RPSPP---NPELRLEAPGASEPLHHHPYKYPAAAYDHYLG 478

  Fly   364 GSSTPTTSPRP 374
            ..|.|...|.|
Human   479 AKSRPAPYPLP 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 101/195 (52%)
TBX1XP_016884414.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2837
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.940

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