DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and tbx20

DIOPT Version :10

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001030292.1 Gene:tbx20 / 619590 XenbaseID:XB-GENE-487334 Length:440 Species:Xenopus tropicalis


Alignment Length:350 Identity:138/350 - (39%)
Similarity:192/350 - (54%) Gaps:52/350 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 MLPSRPTLPG-----VEAKLENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVL 108
            ::|:.|.:|.     :...||..:||.:||.:|||||||||||||||::|||.||::.:|.|.||
 Frog    79 LIPTTPVIPSEEMAKISCSLETKELWDKFHDLGTEMIITKSGRRMFPTIRVSFSGVDADAKYIVL 143

  Fly   109 LEMVPIGDCRYKFS--GSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLD 171
            :::||:.:.||:::  .|.|:.||.|:|..|.|:|:|||||.||.....|.:.|.|||||||.||
 Frog   144 MDIVPVDNKRYRYAYHRSSWLVAGKADPPLPARLYVHPDSPFTGEQLLKQMVSFEKVKLTNNELD 208

  Fly   172 SSGHIVLASMHKYQPRLHIIR----SSELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDN 232
            ..|||:|.||||||||:|||:    ::.|..|.....:.|:|.||.|.|||||||..|||||||:
 Frog   209 QHGHIILNSMHKYQPRVHIIKKKDHTASLLNLKSEEFRTFIFQETVFTAVTAYQNQLITKLKIDS 273

  Fly   233 NPFAKGFRESGQ----------------SRCKRKLNSSGNSTLESEDDGSSVSSCDSPQAKRQRQ 281
            ||||||||:|.:                |..:..:.:.|:..:..| ||.::.|..|  |....:
 Frog   274 NPFAKGFRDSSRLTDIERESVESLIQKHSYARSPIRTYGDEDVLGE-DGQTMQSRGS--AFTTSE 335

  Fly   282 DFEQDSTGSVSPAYYGATHPVANPMSPYLRHHLSYGPSGAAGLPPSIAAAYFGGVPPQILPMPPA 346
            :....|..|.:..:.|..||          ..|:...:..|.|...|.....|.:||        
 Frog   336 NLSLSSWVSSTSGFSGFQHP----------QSLTALGTSTASLATPIPHPIQGTLPP-------- 382

  Fly   347 TYAPTVAPVSP--VASQPVGSSTPT 369
             |:....|::|  :||...||. ||
 Frog   383 -YSRLGMPITPSALASSMQGSG-PT 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 T-box_Drosocross-like 59..241 CDD:410332 104/187 (56%)
tbx20NP_001030292.1 T-box_TBX20-like 94..283 CDD:410319 105/188 (56%)
T-box 98..282 104/183 (57%)
P-loop containing Nucleoside Triphosphate Hydrolases <314..>402 CDD:476819 23/109 (21%)

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