DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and tbx5

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:XP_031756844.1 Gene:tbx5 / 619589 XenbaseID:XB-GENE-486855 Length:522 Species:Xenopus tropicalis


Alignment Length:410 Identity:150/410 - (36%)
Similarity:209/410 - (50%) Gaps:84/410 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 IPD----PFPSMLPFNMPHQQPHMMLPSR-PTLP-------------GVEAKLENNDLWQQFHKI 75
            :||    |.|..|... |.|...|...|: ||.|             |::..|...:||.:||::
 Frog    10 MPDTPVEPEPKELQCE-PKQDNQMGASSKTPTSPQAAFTQQVREGMEGIKVFLHERELWLKFHEV 73

  Fly    76 GTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRM 140
            ||||||||:|||||||.:|.::||..:..|.:|:::||..|.||||:.::|...|.|||..|.|:
 Frog    74 GTEMIITKAGRRMFPSYKVKVTGLNPKTKYILLMDIVPADDHRYKFADNKWSVTGKAEPAMPGRL 138

  Fly   141 YLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKYQPRLHIIRSSELTQLPWAPQQ 205
            |:|||||||||||..|.:.|.|:|||||.||..|||:|.|||||||||||:::.|.... .:...
 Frog   139 YVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNGF-GSKNT 202

  Fly   206 AF---VFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESG-------------------QSRCK 248
            ||   ||.||.|:|||:|||.:||:|||:|||||||||.|.                   :|..:
 Frog   203 AFCTHVFSETAFIAVTSYQNHKITQLKIENNPFAKGFRGSDDMELHRMSRMQSKEYPVVPRSTVR 267

  Fly   249 RKLNS------------SGNSTLESE---DDGSSVSSCDSPQAKRQRQDFEQDSTGSVSPAYY-- 296
            :|::|            :|:|||.|:   ::|.|.:|.|.............:|    .|.|:  
 Frog   268 QKVSSNHSPFSQETRNITGSSTLNSQYQCENGVSSTSQDLLPTSNAYPSLPHES----GPIYHCT 328

  Fly   297 ---GATHPVANPMSPYLRHHLSYGPSGAAGLPPSIAAAYFGGVPPQILPMPPATYAPTVAPVSPV 358
               .:..|..:   .|.:.::...||..   .|...:.|         |.|.::.:.|.:..:..
 Frog   329 KRKASEEPAEH---SYKKPYMDTSPSEE---DPYYRSGY---------PQPSSSSSSTTSFRTES 378

  Fly   359 ASQPV---GSSTPTTSPRPS 375
            |.:..   .||.|.|.|.||
 Frog   379 AQRQACMYASSAPATEPVPS 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 106/208 (51%)
tbx5XP_031756844.1 T-box_TBX4_5-like 57..241 CDD:410315 103/184 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 226 1.000 Inparanoid score I3405
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.060

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