DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and tbx5

DIOPT Version :10

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:XP_031756844.1 Gene:tbx5 / 619589 XenbaseID:XB-GENE-486855 Length:522 Species:Xenopus tropicalis


Alignment Length:410 Identity:150/410 - (36%)
Similarity:209/410 - (50%) Gaps:84/410 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 IPD----PFPSMLPFNMPHQQPHMMLPSR-PTLP-------------GVEAKLENNDLWQQFHKI 75
            :||    |.|..|... |.|...|...|: ||.|             |::..|...:||.:||::
 Frog    10 MPDTPVEPEPKELQCE-PKQDNQMGASSKTPTSPQAAFTQQVREGMEGIKVFLHERELWLKFHEV 73

  Fly    76 GTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRM 140
            ||||||||:|||||||.:|.::||..:..|.:|:::||..|.||||:.::|...|.|||..|.|:
 Frog    74 GTEMIITKAGRRMFPSYKVKVTGLNPKTKYILLMDIVPADDHRYKFADNKWSVTGKAEPAMPGRL 138

  Fly   141 YLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKYQPRLHIIRSSELTQLPWAPQQ 205
            |:|||||||||||..|.:.|.|:|||||.||..|||:|.|||||||||||:::.|.... .:...
 Frog   139 YVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNGF-GSKNT 202

  Fly   206 AF---VFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESG-------------------QSRCK 248
            ||   ||.||.|:|||:|||.:||:|||:|||||||||.|.                   :|..:
 Frog   203 AFCTHVFSETAFIAVTSYQNHKITQLKIENNPFAKGFRGSDDMELHRMSRMQSKEYPVVPRSTVR 267

  Fly   249 RKLNS------------SGNSTLESE---DDGSSVSSCDSPQAKRQRQDFEQDSTGSVSPAYY-- 296
            :|::|            :|:|||.|:   ::|.|.:|.|.............:|    .|.|:  
 Frog   268 QKVSSNHSPFSQETRNITGSSTLNSQYQCENGVSSTSQDLLPTSNAYPSLPHES----GPIYHCT 328

  Fly   297 ---GATHPVANPMSPYLRHHLSYGPSGAAGLPPSIAAAYFGGVPPQILPMPPATYAPTVAPVSPV 358
               .:..|..:   .|.:.::...||..   .|...:.|         |.|.::.:.|.:..:..
 Frog   329 KRKASEEPAEH---SYKKPYMDTSPSEE---DPYYRSGY---------PQPSSSSSSTTSFRTES 378

  Fly   359 ASQPV---GSSTPTTSPRPS 375
            |.:..   .||.|.|.|.||
 Frog   379 AQRQACMYASSAPATEPVPS 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 T-box_Drosocross-like 59..241 CDD:410332 103/184 (56%)
tbx5XP_031756844.1 T-box_TBX4_5-like 57..241 CDD:410315 103/184 (56%)

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