DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and tbx2a

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:XP_005165613.1 Gene:tbx2a / 573084 ZFINID:ZDB-GENE-990917-4 Length:690 Species:Danio rerio


Alignment Length:528 Identity:160/528 - (30%)
Similarity:229/528 - (43%) Gaps:197/528 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 HQQPHM-----MLPSRPTLPGVEAKLENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEE 102
            ||..|:     :.|........:..||..:||.|||||||||:||||||||||..:|.::||:::
Zfish    72 HQAAHLRSFKGLEPEEDVEDDPKVTLEAKELWDQFHKIGTEMVITKSGRRMFPPFKVRVNGLDKK 136

  Fly   103 ASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTN 167
            |.|.:|:::|...||||||..|:|:.||.|:|:.|:|||:||||||||..|.::.:.|:|:||||
Zfish   137 AKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTN 201

  Fly   168 NTLDSSGHIVLASMHKYQPRLHIIRSSELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDN 232
            |..|..|..:|.||||||||.||:|::::.:||::..:.:|||||:|:||||||||:||:|||||
Zfish   202 NISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDN 266

  Fly   233 NPFAKGFRESGQSRCKRKLN--------------------------------------------- 252
            ||||||||::|..|.::.||                                             
Zfish   267 NPFAKGFRDTGNGRREKSLNFRKQLAMPSMRMYDDQCKVDRDGGDSDDSSCEQTTGRDSVHSPTG 331

  Fly   253 -----------------SSGNSTLESEDDGS-SVSSCDS-PQA---------------------- 276
                             :..::.|:..|||. .|||.:. ||:                      
Zfish   332 PATSPLKFTRSREDKNFNESDNELDQHDDGMIRVSSPEQRPQSPFSPRCEDRVKDRLNLEKKGDY 396

  Fly   277 --KRQRQDF-------------------------EQDSTG--------------SVSPAYYGATH 300
              .|:..|.                         |.||.|              :.:|:::.|:|
Zfish   397 SDSRKENDSAFSIRHLDKDKLDARNVKDQDSSKKEADSVGMSTVKDGFSPLMVQTENPSHFSASH 461

  Fly   301 PVA------------NPMS---PYLRH-----------------HLSYGPSGAAGL--------- 324
            ..:            ||:|   ..|.|                 ||....|||:||         
Zfish   462 LQSLALSGLHNQHFFNPLSSGQSLLFHPGQFAMTPSAFSTMGMGHLLASMSGASGLENGSLSSQS 526

  Fly   325 -----------------PPSIAAAYFGGVPPQILPMPPATYAPTVAPVSPVASQPVGSSTPTTSP 372
                             ...|:...|||    :||.|   |....|..:..::.|.||:..:.|.
Zfish   527 TSSPNPFPFHLSQHMLASQGISMPTFGG----LLPYP---YTYMAAAAAAASALPAGSAASSLSR 584

  Fly   373 RPSTSTKR 380
            .|..:..|
Zfish   585 NPFLNNTR 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 108/186 (58%)
tbx2aXP_005165613.1 TBOX 92..277 CDD:238106 107/184 (58%)
TBX 297..372 CDD:204975 7/74 (9%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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