DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and tbx18

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_705951.1 Gene:tbx18 / 572713 ZFINID:ZDB-GENE-020529-2 Length:554 Species:Danio rerio


Alignment Length:420 Identity:154/420 - (36%)
Similarity:208/420 - (49%) Gaps:89/420 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PDPFPSMLPFNMPHQQPHMMLPSRPTLPGVEAK--LENNDLWQQFHKIGTEMIITKSGRRMFPSM 92
            |:|...:|....|..|...:|....|..|.|.:  |:.:|||::||:|||||||||:||||||:|
Zfish    78 PEPEDVLLDSPQPASQGAQVLVQSATSSGEEMRVDLQGSDLWKRFHEIGTEMIITKAGRRMFPAM 142

  Fly    93 RVSLSGLEEEASYCVLLEMVPIGDCRYK--FSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQS 155
            ||.::||:....|.:.:::||:.:.||:  :..|:|:.||.|:...|.|:|:||||||:|..|..
Zfish   143 RVKIAGLDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMR 207

  Fly   156 QALLFNKVKLTNNTLDSSGHIVLASMHKYQPRLHIIR---SSELTQLPWAPQ----QAFVFPETE 213
            |.:.|:|:|||||.||..|||:|.||||||||:|:||   ..||:.:...|.    :||.|.||.
Zfish   208 QVISFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKECGEELSPVKAVPTGDGVKAFSFTETV 272

  Fly   214 FVAVTAYQNDRITKLKIDNNPFAKGFRESGQSRCKRKLNSSGNS---------TLESED------ 263
            |..||||||.:||:||||.||||||||:||::|  ..|.:...|         ||..||      
Zfish   273 FTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNR--MGLEALVESYAFWRPSLRTLTFEDILGITK 335

  Fly   264 ---------DGSSV-----SSCDSPQAKRQRQDFEQDSTGSVSPAYYGATHPVANPMSPYLRHHL 314
                     .|||.     |||.||       .|...| |:.....|......::|:     |. 
Zfish   336 QGAAGSHGVVGSSAHLLSSSSCPSP-------TFHLGS-GAGPVCDYSTCSRTSHPL-----HR- 386

  Fly   315 SYGPSGAA------------GLPPSIAAAYFG------------GVPPQILPMPPATYAPTVAPV 355
             ||||.:|            ....|.::.|..            |:|.||..||..|        
Zfish   387 -YGPSLSADSYSRLTSPTADAFSTSRSSTYVSGTESEAFSCTQTGLPIQIHSMPSTT-------- 442

  Fly   356 SPVASQPVGSSTPTTSPRPSTSTKRNSFSI 385
            |.:.....|.:....|...||....|.|.:
Zfish   443 SQLQYLMPGHAHNAFSTNQSTQGSYNGFRL 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 105/197 (53%)
tbx18NP_705951.1 TBOX 109..304 CDD:238106 103/194 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2837
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.040

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