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Protein Alignment Doc1 and tbr1a

DIOPT Version :9

Sequence 1:	NP_648283.1	Gene:	Doc1 / 39039	FlyBaseID:	FBgn0028789	Length:	391	Species:	Drosophila melanogaster
Sequence 2:	XP_693121.1	Gene:	tbr1a / 564699	ZFINID:	ZDB-GENE-060810-93	Length:	585	Species:	Danio rerio

Alignment Length:	250	Identity:	106/250 - (42%)
Similarity:	148/250 - (59%)	Gaps:	25/250 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly    39 FNMPHQQPH--MMLPSRPTLPG-VEAKLENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLE 100
            :..|::|.:  ..:.|.|.:.| .:..|.|..||.:||:..|||||||.||||||.:..::|||:
Zfish   120 YPQPYEQTYANAAVYSFPAVSGKAQVYLCNRALWFKFHRHQTEMIITKQGRRMFPCLTFNVSGLD 184

  Fly   101 EEASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQ-SPQRMYLHPDSPATGAHWQSQALLFNKVK 164
            ....|.:.::::......::|.|.:|||.|.|:.. :..|:|.|||||.|||||..|.:.|.|:|
Zfish   185 PAGHYNIAVDVILADPNHWRFQGGKWVPCGKADTNVTGNRVYTHPDSPNTGAHWMRQEISFGKLK 249

  Fly   165 LTNNTLDSSGH---IVLASMHKYQPRLHIIRSS----ELTQLPWAPQQAFVFPETEFVAVTAYQN 222
            ||||...||.:   |||.|:||||||:|:|..|    |.|..| ...|.|.||||:|::||||||
Zfish   250 LTNNKGASSNNTQMIVLQSLHKYQPRVHVIEISKNEDEDTSDP-DGVQTFTFPETQFISVTAYQN 313

  Fly   223 DRITKLKIDNNPFAKGFRESGQSRCKRKLNSSGNSTLESEDDGSSVSSCDSPQAK 277
            ..||:||||:||||||||::             ..|..|.|:...::..|||.::
Zfish   314 TDITQLKIDHNPFAKGFRDN-------------YDTKYSMDNTDRLTPSDSPHSQ 355

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.