DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and tbx22

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:XP_005157203.1 Gene:tbx22 / 556143 ZFINID:ZDB-GENE-090626-2 Length:444 Species:Danio rerio


Alignment Length:315 Identity:127/315 - (40%)
Similarity:169/315 - (53%) Gaps:45/315 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VEAKLENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGD--CRYKF 121
            |...|:.:|||::|::|||||||||.|||||||:||.:..|:....|.:.::::|:..  .||.:
Zfish    68 VRVDLQGSDLWKRFYEIGTEMIITKVGRRMFPSIRVKVHNLDPLQQYSIAMDIMPMDSKKYRYVY 132

  Fly   122 SGSQWVPAGGAEPQS-PQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKYQ 185
            ..||||.||..:... |..:|:|||||.:|.:|..|.:.|::||||||.||..|||:|.|||||:
Zfish   133 HSSQWVIAGNTDHSCIPPHLYVHPDSPCSGENWMRQVISFDRVKLTNNELDDRGHIILKSMHKYR 197

  Fly   186 PRLHII-------RSSELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESG 243
            ||:|:|       .|..|..||......|.||||:|..||||||.:|||||||.|||||||||  
Zfish   198 PRIHVILHCPPECLSKRLLSLPADGVFTFSFPETQFTTVTAYQNQQITKLKIDRNPFAKGFRE-- 260

  Fly   244 QSRCKRKLNSSGNSTLESEDDGSSVSSCDSPQAKRQRQDFEQDSTG---SVSPAYYGATHPVANP 305
                  :..:..:..|||....|..:...|...:.|.:.|...::|   |||.|.  |.||.|  
Zfish   261 ------RNGAVLDGILESYSWHSPFNGFKSLAMELQGRCFGSSASGITPSVSSAQ--AVHPTA-- 315

  Fly   306 MSPYLRHHLSYGPSGAAGLPPSIAAAY----------FGGVPPQILPMPPATYAP 350
                     ...|.....||.|...||          :.|:.| :|.:|..|..|
Zfish   316 ---------FSSPQCCKILPSSCFLAYRAYCSICLNNYTGLRP-MLDLPLLTSLP 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 99/195 (51%)
tbx22XP_005157203.1 TBOX 67..260 CDD:238106 97/191 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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