DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and tbx6

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001007995.1 Gene:tbx6 / 493357 XenbaseID:XB-GENE-6257419 Length:517 Species:Xenopus tropicalis


Alignment Length:389 Identity:158/389 - (40%)
Similarity:210/389 - (53%) Gaps:67/389 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 HEIYRQQIM----QRIPDPFPSMLP----FNMPHQQPHMMLP-------------SRPTLPG-VE 60
            ||.||...:    ||....||::.|    ...|...|..:.|             ..|.||| |:
 Frog    33 HEAYRYPELDVPGQRFDGLFPALDPSQRILGAPPLTPLSLPPGPALGFGQLQPPCETPQLPGNVK 97

  Fly    61 AKLENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQ 125
            ..|||.:||:|||.||||||||||||||||..:||::|||.:..|.:|.::|||.:.|||:...:
 Frog    98 MNLENKELWKQFHSIGTEMIITKSGRRMFPQCKVSVTGLEPDGKYLLLADIVPIDNSRYKWQEDR 162

  Fly   126 WVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKYQPRLHI 190
            |.|:|.|||:.|:|:|:||||||.|:||..|.:.|:|:||||||||..|||:|.||||||||.||
 Frog   163 WEPSGRAEPRLPERVYIHPDSPAPGSHWMKQPISFHKIKLTNNTLDQMGHIILHSMHKYQPRFHI 227

  Fly   191 IRSSELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESG-------QSRCK 248
            :|:.::....|....:|.||||.|:.||||||::||:|||..|||||||||.|       .:|.|
 Frog   228 VRAQDVFSRRWGGCSSFTFPETLFLTVTAYQNEKITQLKIQTNPFAKGFREDGMKSKRDRSTRVK 292

  Fly   249 RKLNSSGNSTLESEDDGSSVSSCDSPQAKRQRQDFEQDSTGSVSPAYYGATHPVANPMSPYLRHH 313
            ||:       :|.|::....    .|:.:.:|            |.|.|       |....|...
 Frog   293 RKV-------IEPEEEEEEF----QPEGECKR------------PLYTG-------PCDSTLSEE 327

  Fly   314 LSYGPSGAAGLP-PSIAAAYFGGVPPQILPMPPATYAPTVAPVSPVASQPVGSSTPTTSPRPST 376
            |..|  ...|:| ||...::....||.  ..||:|..|.   .|..|:|..|::...:|..|.|
 Frog   328 LDIG--RGLGIPLPSPDCSFHPITPPS--RTPPSTQTPN---PSLTANQEQGAALEMSSQTPET 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 111/194 (57%)
tbx6NP_001007995.1 T-box 100..278 CDD:307177 106/177 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 276..318 14/64 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 333..418 17/57 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003805
OrthoInspector 1 1.000 - - mtm9366
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4271
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.010

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