DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc1 and vegt

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_988858.1 Gene:vegt / 394452 XenbaseID:XB-GENE-1033829 Length:455 Species:Xenopus tropicalis


Alignment Length:394 Identity:153/394 - (38%)
Similarity:200/394 - (50%) Gaps:75/394 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 QPHMMLPSRPTLPGVEAKLENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLL 109
            |..:.||:     .|.|.||:..||.|||:.|||||||||||||.|..::.|.||...|.|.:|:
 Frog    39 QDSLYLPN-----SVGASLEDQVLWAQFHQEGTEMIITKSGRRMLPQCKIRLFGLHPYAKYMLLV 98

  Fly   110 EMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSG 174
            :.||:.:.|||::.:||..||.|||..|.|.|:||||||.||||...|:.|.|:||||||||..|
 Frog    99 DFVPLDNFRYKWNKNQWEAAGKAEPHPPCRTYVHPDSPAPGAHWMKDAICFQKLKLTNNTLDQQG 163

  Fly   175 HIVLASMHKYQPRLHIIRSSELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGF 239
            ||:|.|||:|:||.|:::|.::...||...|.|.||||||.|||||||::||||||::|||||||
 Frog   164 HIILHSMHRYKPRFHVVQSDDMYNSPWGLVQVFSFPETEFTAVTAYQNEKITKLKINHNPFAKGF 228

  Fly   240 RESGQSRCKR-------KLNSSGNSTLESEDDGSSVSSCDSPQAKRQRQDFEQDSTGSV------ 291
            ||. :.|.||       :.:.|.....:..:|.......|.|:|.|.:::...|..|..      
 Frog   229 REQ-ERRHKRDDVLKTLQQSPSKRQKRKKWEDSPEAEISDFPKATRVKEESIMDPAGVYQNWVSD 292

  Fly   292 ----------SPAYYGATHPVANPMS--------PYLR--HHLS----YGPSGAAGLPPSIAA-- 330
                      ||...||......|.|        ||.|  .|||    .|...:..|.|.:|.  
 Frog   293 HEANQGLTPHSPESEGANQEQQVPSSSSNFYNRNPYRRSSQHLSSPYDLGEPSSRRLTPDVATVP 357

  Fly   331 -------AYFGGVPPQ------------------ILPMPPATYAPTVAPVSPVASQ----PVG-S 365
                   |....:|.|                  ..|:..|.|:|..|....|.:|    |:| :
 Frog   358 DSDPDSLAVLHVIPTQNSTQDRTCGVNFSMEAQMKQPLRGAMYSPYGAEQWMVPAQGQYRPMGYT 422

  Fly   366 STPT 369
            :.||
 Frog   423 AYPT 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 109/186 (59%)
vegtNP_988858.1 TBOX 51..234 CDD:238106 107/183 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 229..276 11/47 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..360 16/64 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003805
OrthoInspector 1 1.000 - - mtm9366
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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