DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc1 and byn

DIOPT Version :9

Sequence 1:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster


Alignment Length:381 Identity:129/381 - (33%)
Similarity:184/381 - (48%) Gaps:98/381 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 LENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWV 127
            |::.:||.:|..:..|||:||:||||||.:::|.|||:..|.|.||||.|.|...|:|:...:||
  Fly    91 LDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKYVNGEWV 155

  Fly   128 PAGGAE--PQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKYQPRLHI 190
            |.|.||  |.:|  :|:||:||..||||..:.:.|.||||||.| :.:|.|:|.|:|||:||:|:
  Fly   156 PGGKAEVPPSNP--IYVHPESPNFGAHWMKEPISFAKVKLTNKT-NGNGQIMLNSLHKYEPRVHL 217

  Fly   191 IR-SSELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRES------------ 242
            :| .||...:...|     ||||:|:|||||||:.:|.|||..|||||.|.::            
  Fly   218 VRVGSEQRHVVTYP-----FPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKERPDTLYPHDT 277

  Fly   243 ---------------------------GQSRCKRKLNSSGNSTLESEDDG-SSVSSCDSPQAKRQ 279
                                       .||   ..|.:|..|...:|..| ||..|||     |.
  Fly   278 HYGWLIPPPTHYTAAAAAVAAPPPLSIAQS---HGLVASCPSVSSAESVGPSSGGSCD-----RY 334

  Fly   280 RQDFEQDSTGSVSPAYYGATHPVANPMSPYLRHHLSYGPSGAAGLPPSIAAAYFGGVPPQILPMP 344
            .:..   |:.||:|.   .|.|.:.|     |.....|.:|:||...|.:            |.|
  Fly   335 GRSL---SSRSVAPT---RTTPYSRP-----RVVSGSGSNGSAGNASSTS------------PQP 376

  Fly   345 PATYAPTVAPVSPVASQPVGSSTPTTS----------PRPSTSTKRNSFSISAILA 390
            |:      ||.:|.:.....:.:.:||          ..|||....:|::.|..::
  Fly   377 PS------APQTPTSLHSTSTGSVSTSVSSSSGGGIGSAPSTGCFSSSYAQSGFMS 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc1NP_648283.1 TBOX 58..245 CDD:238106 90/223 (40%)
bynNP_524031.2 TBOX 86..268 CDD:238106 90/184 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.